RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 MCL1Q07820 350 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 CCDC149Q6ZUS6 474 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 HAUS6Q7Z4H7 955 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 ZBTB33Q86T24 672 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 TDRD5Q8NAT2 981 aaKnown RBP15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 LNX1Q8TBB1 728 aaPredicted RBP15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 RAD54LQ92698 747 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 SNX21Q969T3 373 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 CNTN3Q9P232 1028 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 STK17AQ9UEE5 414 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 USP20Q9Y2K6 914 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 TMEM221A6NGB7 291 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 F8W810 466 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 M0R296 226 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 ABLIM1O14639 778 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 TGM5O43548 720 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 TRAK2O60296 914 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 FAM13AO94988 1023 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 KIF4AO95239 1232 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 CLTAP09496 248 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 FGFR3P22607 806 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PAX3P23760 479 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PSEN1P49768 467 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 CLCNKBP51801 687 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 RAD51AP2Q09MP3 1159 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 MTMR3Q13615 1198 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 NOLC1Q14978 699 aaKnown RBP eCLIP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PTPAQ15257 358 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 ANKS3Q6ZW76 656 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PALB2Q86YC2 1186 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 MYCT1Q8N699 235 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 KRI1Q8N9T8 703 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 NXPE3Q969Y0 559 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PBXIP1Q96AQ6 731 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 FAM122AQ96E09 287 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 PAAF1Q9BRP4 392 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 ST6GALNAC4Q9H4F1 302 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 WDR6Q9NNW5 1121 aaKnown RBP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 BLOC1S4Q9NUP1 217 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 BACE2Q9Y5Z0 518 aa15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 ZFP37Q9Y6Q3 630 aaPredicted RBP15.89■□□□□ 0.13
NIF3L1-205ENST00000409588 TRIOO75962 3097 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 C2CD4DB7Z1M9 353 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 STX6O43752 255 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 PIGRP01833 764 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 HNRNPA1P09651 372 aaKnown RBP eCLIP15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 PLCG1P19174 1290 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 HOXA9P31269 272 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 POU5F1Q01860 360 aaKnown RBP15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 RAB33AQ14088 237 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 SLC39A14Q15043 492 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 PSMD5Q16401 504 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 RTP2Q5QGT7 225 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 CEP57Q86XR8 500 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 CD302Q8IX05 232 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 KREMEN2Q8NCW0 462 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 SNX27Q96L92 541 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 CLSTN3Q9BQT9 956 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 REEP2Q9BRK0 252 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 PRKD2Q9BZL6 878 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 IGSF9Q9P2J2 1179 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 TBX20Q9UMR3 447 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 CLIC4Q9Y696 253 aa15.88■□□□□ 0.13
NIF3L1-205ENST00000409588 SYN3O14994 580 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 XPOTO43592 962 aaKnown RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 TBCAO75347 108 aaKnown RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 ZMYND10O75800 440 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 POU2F2P09086 479 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 CYP3A5P20815 502 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 PLA2G5P39877 138 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 OSTNP61366 133 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 GTF2BQ00403 316 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 RESTQ13127 1097 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 KARSQ15046 597 aaKnown RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 RRAGBQ5VZM2 374 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 SLFN12LQ6IEE8 588 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 CCDC73Q6ZRK6 1079 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 HFE2Q6ZVN8 426 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 SUGP1Q8IWZ8 645 aaKnown RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 RABGGTAQ92696 567 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 BICD1Q96G01 975 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 OXCT2Q9BYC2 517 aaPredicted RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 PIDD1Q9HB75 910 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 SEL1LQ9UBV2 794 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 LIMD1Q9UGP4 676 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 FBXO2Q9UK22 296 aaPredicted RBP15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 MAFFQ9ULX9 164 aa15.87■□□□□ 0.13
NIF3L1-205ENST00000409588 H7C4K7 107 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 WEE2P0C1S8 567 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 MATR3P43243 847 aaKnown RBP eCLIP15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 LIG4P49917 911 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 DHX8Q14562 1220 aaKnown RBP15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 MCM6Q14566 821 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 SLC10A6Q3KNW5 377 aa15.86■□□□□ 0.13
NIF3L1-205ENST00000409588 GLRA4Q5JXX5 417 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms