RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 A0A087WZ62 844 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 A0A1W2PQJ5 194 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 TISP43B9A030 160 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 OGTO15294 1046 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 ALS2CLQ60I27 953 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 CCHCR1Q8TD31 782 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 HPDLQ96IR7 371 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 FDXACB1Q9BRP7 624 aaPredicted RBP19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 THAP2Q9H0W7 228 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 PRDM5Q9NQX1 630 aaPredicted RBP19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 TTI1O43156 1089 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 PSMD6Q15008 389 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 KNDC1Q76NI1 1749 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 SPOPLQ6IQ16 392 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 KATNAL1Q9BW62 490 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 NIF3L1Q9GZT8 377 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 RASSF4Q9H2L5 321 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 RBM12Q9NTZ6 932 aaKnown RBP19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 BAIAP2L1Q9UHR4 511 aa19.05■□□□□ 0.64
PTPDC1-202ENST00000375360 SGPL1O95470 568 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 INSRRP14616 1297 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 ARHGAP25P42331 645 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 PDCLQ13371 301 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 SV2AQ7L0J3 742 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 APPL2Q8NEU8 664 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 DHX38Q92620 1227 aaKnown RBP19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 IL17RAQ96F46 866 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 GSTA1P08263 222 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 GSTA2P09210 222 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 CHRNA3P32297 505 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 LIG3P49916 1009 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 MMP14P50281 582 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 IL9RQ01113 521 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 URGCPQ8TCY9 931 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 TRIM51Q9BSJ1 452 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 SETD4Q9NVD3 440 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 ARHGAP20Q9P2F6 1191 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 TTC13Q8NBP0 860 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 KCNH4Q9UQ05 1017 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 CAPN6Q9Y6Q1 641 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 TOM1L1O75674 476 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 GUCY2CP25092 1073 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 NAMPTP43490 491 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 SLC5A5Q92911 643 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 THOC1Q96FV9 657 aaKnown RBP19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 BTBD6Q96KE9 485 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 KIF9Q9HAQ2 790 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 OLFML3Q9NRN5 406 aa19.04■□□□□ 0.64
PTPDC1-202ENST00000375360 FGRP09769 529 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 MYBL1P10243 752 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 CASP5P51878 434 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 SMTNL2Q2TAL5 461 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 CYP4A22Q5TCH4 519 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 TAF1DQ9H5J8 278 aaPredicted RBP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 ADAM21Q9UKJ8 722 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 TMEM119Q4V9L6 283 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 NT5DC1Q5TFE4 455 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 NT5C1AQ9BXI3 368 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 KLC2Q9H0B6 622 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 UVRAGQ9P2Y5 699 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 CLTAP09496 248 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 SRGAP2BP0DMP2 458 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 ALDH5A1P51649 535 aaPredicted RBP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 MDM2Q00987 491 aaPredicted RBP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 NYAP1Q6ZVC0 841 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 DDX42Q86XP3 938 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 CPB2Q96IY4 423 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 CLMNQ96JQ2 1002 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 PRG3Q9Y2Y8 225 aaPredicted RBP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 SH3BP5O60239 455 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 KRT14P02533 472 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 TTC39CQ8N584 583 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 ACSF2Q96CM8 615 aaPredicted RBP19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 WDR18Q9BV38 432 aa19.03■□□□□ 0.64
PTPDC1-202ENST00000375360 ASTN2O75129 1339 aaPredicted RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 ATP9AO75110 1047 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 FGFR4P22455 802 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 ADORA2AP29274 412 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 PAN2Q504Q3 1202 aaKnown RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 TATDN1Q6P1N9 297 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 BZW1Q7L1Q6 419 aaKnown RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 SRRM1Q8IYB3 904 aaKnown RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 DNERQ8NFT8 737 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 HVCN1Q96D96 273 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 GLT1D1Q96MS3 346 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 OSMRQ99650 979 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 ITGB5P18084 799 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 GARSP41250 739 aaKnown RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 SH3RF1Q7Z6J0 888 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 C1orf131Q8NDD1 294 aaKnown RBP19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 DNAJC7Q99615 494 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 CAPN7Q9Y6W3 813 aa19.02■□□□□ 0.64
PTPDC1-202ENST00000375360 RRN3P2A6NIE6 340 aa19.02■□□□□ 0.63
PTPDC1-202ENST00000375360 MMEP08473 750 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms