RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GTF3C4Q9UKN8 822 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 SLC45A1Q9Y2W3 748 aa19.19■□□□□ 0.66
CTSA-204ENST00000372484 ZSCAN5CA6NGD5 496 aaPredicted RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 TMEM110-MUSTN1A8MSY1 372 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 CCDC188H7C350 402 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 FAM189A1O60320 539 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 MTA2O94776 668 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 CYP1A2P05177 515 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 GJB1P08034 283 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 BPIFB4P59827 614 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 ARHGAP1Q07960 439 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 CUL2Q13617 745 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 TFDP1Q14186 410 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 MESDQ14696 234 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 GJC2Q5T442 439 aaPredicted RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 DCAF12L1Q5VU92 463 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 ACAD10Q6JQN1 1059 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 SND1Q7KZF4 910 aaKnown RBP eCLIP19.18■□□□□ 0.661e-7■■■□□ 14.8
CTSA-204ENST00000372484 ZNF668Q96K58 619 aaPredicted RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 NUP85Q9BW27 656 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 APOBEC3GQ9HC16 384 aaKnown RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 IVNS1ABPQ9Y6Y0 642 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 ESYT3A0FGR9 886 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 FGGP02679 453 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 LAMC2Q13753 1193 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 NCOA4Q13772 614 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 CLEC16AQ2KHT3 1053 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 TAPT1Q6NXT6 567 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 EMBQ6PCB8 327 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 ZNF564Q8TBZ8 553 aaPredicted RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 IFT81Q8WYA0 676 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 ZBTB10Q96DT7 871 aa19.18■□□□□ 0.66
CTSA-204ENST00000372484 TTC7AQ9ULT0 858 aaPredicted RBP19.18■□□□□ 0.66
CTSA-204ENST00000372484 MIF4GDA9UHW6 222 aaKnown RBP19.17■□□□□ 0.66
CTSA-204ENST00000372484 INO80B-WBP1J3KQ70 363 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 OGTO15294 1046 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 CLCN3P51790 818 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 NOP14P78316 857 aaKnown RBP19.17■□□□□ 0.66
CTSA-204ENST00000372484 MCL1Q07820 350 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 ZNF677Q86XU0 584 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 UBL4BQ8N7F7 174 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 BRI3BPQ8WY22 251 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 FAM212AQ96EL1 285 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 RNPC3Q96LT9 517 aaKnown RBP19.17■□□□□ 0.66
CTSA-204ENST00000372484 INO80BQ9C086 356 aaPredicted RBP19.17■□□□□ 0.66
CTSA-204ENST00000372484 VTA1Q9NP79 307 aa19.17■□□□□ 0.66
CTSA-204ENST00000372484 SART1O43290 800 aaKnown RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 STRNO43815 780 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 ITGA4P13612 1032 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 TBXAS1P24557 533 aaPredicted RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 CARSP49589 748 aaKnown RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 AP3M2P53677 418 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 IGBP1P78318 339 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 WDR49Q8IV35 697 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 ALG3Q92685 438 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 RPS6KC1Q96S38 1066 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 IMPG2Q9BZV3 1241 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 DDX47Q9H0S4 455 aaKnown RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 MED4Q9NPJ6 270 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 UVRAGQ9P2Y5 699 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 ACKR2O00590 384 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 GH1P01241 217 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 CLTAP09496 248 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 ACO1P21399 889 aaKnown RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 COMTP21964 271 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 GCLCP48506 637 aaPredicted RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 PAK2Q13177 524 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 GRM1Q13255 1194 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 TMEM132AQ24JP5 1023 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 TMEM270Q6UE05 265 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 NAP1L3Q99457 506 aaPredicted RBP19.16■□□□□ 0.66
CTSA-204ENST00000372484 NFU1Q9UMS0 254 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 NUB1Q9Y5A7 615 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 PCDHB4Q9Y5E5 795 aa19.16■□□□□ 0.66
CTSA-204ENST00000372484 ABLIM1O14639 778 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 LGALS2P05162 132 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 UNGP13051 313 aaPredicted RBP19.15■□□□□ 0.66
CTSA-204ENST00000372484 AARSP49588 968 aaKnown RBP eCLIP19.15■□□□□ 0.66
CTSA-204ENST00000372484 ZNF211Q13398 564 aaPredicted RBP19.15■□□□□ 0.66
CTSA-204ENST00000372484 ATF7IP2Q5U623 682 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 MPZL3Q6UWV2 235 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 TSHZ1Q6ZSZ6 1077 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 ANKRD23Q86SG2 305 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 ABRAQ8N0Z2 381 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 CASKIN2Q8WXE0 1202 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 FZD8Q9H461 694 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 CNOT8Q9UFF9 292 aaKnown RBP19.15■□□□□ 0.66
CTSA-204ENST00000372484 CPSF3Q9UKF6 684 aaKnown RBP19.15■□□□□ 0.66
CTSA-204ENST00000372484 ASAP2O43150 1006 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 C22orf31O95567 290 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 INSRRP14616 1297 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 FAM71BQ8TC56 605 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 KRT35Q92764 455 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 CAVIN3Q969G5 261 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 BTBD6Q96KE9 485 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 ZSWIM1Q9BR11 485 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 MTMR12Q9C0I1 747 aa19.15■□□□□ 0.66
CTSA-204ENST00000372484 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.15■□□□□ 0.66
CTSA-204ENST00000372484 MORF4L1Q9UBU8 362 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms