RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 METTL24Q5JXM2 366 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CDPF1Q6NVV7 123 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 UNC5DQ6UXZ4 953 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 REC114Q7Z4M0 266 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 STRA8Q7Z7C7 330 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 C12orf40Q86WS4 652 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PPM1KQ8N3J5 372 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 FBXO27Q8NI29 283 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 RSAD2Q8WXG1 361 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TAF4BQ92750 862 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 EZH1Q92800 747 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 DDX11Q96FC9 970 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 CCDC94Q9BW85 323 aaPredicted RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TARS2Q9BW92 718 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 WNT10AQ9GZT5 417 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 KCNF1Q9H3M0 494 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 AGO4Q9HCK5 861 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 SSU72Q9NP77 194 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM105AQ9NUU6 356 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 DLL3Q9NYJ7 618 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 DKK3Q9UBP4 350 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 HERC5Q9UII4 1024 aaKnown RBP3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 PCOLCE2Q9UKZ9 415 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 TMEM98Q9Y2Y6 226 aa3.93□□□□□ -1.78
ECHDC1-205ENST00000368295 UBN2Q6ZU65 1347 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SYNDIG1LA6NDD5 238 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 AREL1O15033 823 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 CTAGE5O15320 804 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 NCAM2O15394 837 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PDGFBP01127 241 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PAX7P23759 505 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PRPHP41219 470 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 GIPRP48546 466 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 CDK8P49336 464 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 MAN2A2P49641 1150 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ZNF165P49910 485 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ALDH5A1P51649 535 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ETF1P62495 437 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 BTKQ06187 659 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 RING1Q06587 406 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PPP2R5DQ14738 602 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 DHCR24Q15392 516 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ATP13A4Q4VNC1 1196 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 C1orf141Q5JVX7 400 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SUSD4Q5VX71 490 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ITPRIPL1Q6GPH6 555 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 TMCO3Q6UWJ1 677 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 CCBE1Q6UXH8 406 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SPOCD1Q6ZMY3 1216 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PRR23CQ6ZRP0 262 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 BEND4Q6ZU67 534 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SPATC1Q76KD6 591 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 BTN2A1Q7KYR7 527 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 C16orf59Q7L2K0 433 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 CLEC10AQ8IUN9 316 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SLITRK4Q8IW52 837 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 TPH2Q8IWU9 490 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 CCDC144CPQ8IYA2 1237 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 COLGALT2Q8IYK4 626 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SMYD4Q8IYR2 804 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 DCLK2Q8N568 766 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 AGBL3Q8NEM8 1001 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 GSDMBQ8TAX9 411 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 FBLIM1Q8WUP2 373 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 TRIB2Q92519 343 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ISL2Q96A47 359 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 GSDMAQ96QA5 445 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SEC62Q99442 399 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 SLX1AQ9BQ83 275 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ELAC1Q9H777 363 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 PIH1D1Q9NWS0 290 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 UBP1Q9NZI7 540 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 WDR35Q9P2L0 1181 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 ADAM30Q9UKF2 790 aa3.92□□□□□ -1.78
ECHDC1-205ENST00000368295 DOCK3Q8IZD9 2030 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 GAKO14976 1311 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TNKSO95271 1327 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SYNJ2BP-COX16A0A087WUM0 186 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 FAM95CA0A1B0GW59 222 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PLD2O14939 933 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 AKR1B10O60218 316 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 DKC1O60832 514 aaKnown RBP eCLIP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TIPRLO75663 272 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ARP10275 920 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ACRP10323 421 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CETPP11597 493 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 STMN1P16949 149 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 XPAP23025 273 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 ABCD1P33897 745 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CRKP46108 304 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 CACNB2Q08289 660 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 DMTNQ08495 405 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 DMWDQ09019 674 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 LRRC74AQ0VAA2 488 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 STAT4Q14765 748 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 SEZ6Q53EL9 994 aa3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 PLEKHO1Q53GL0 409 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-205ENST00000368295 TLDC1Q6P9B6 456 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms