RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CIB2O75838 187 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PSMA2P25787 234 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 RHBDL3P58872 404 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 ACTR2P61160 394 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 SLC18A3Q16572 532 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 MUM1L1Q5H9M0 696 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 NIPA1Q7RTP0 329 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PRRT2Q7Z6L0 340 aaPredicted RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 GSDMBQ8TAX9 411 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 LENG1Q96BZ8 264 aaPredicted RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 COLEC11Q9BWP8 271 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 CAPS2Q9BXY5 557 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PXMP2Q9NR77 195 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PRMT7Q9NVM4 692 aaPredicted RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 MSH4O15457 936 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 SEPT4O43236 478 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 IL18RAPO95256 599 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 INHBAP08476 426 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 SLC1A1P43005 524 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 FMO5P49326 533 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 SLC26A2P50443 739 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 MKRN4PQ13434 485 aaPredicted RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 ARID5BQ14865 1188 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 TMEM132BQ14DG7 1078 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PKN1Q16512 942 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 CCL14Q16627 93 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PTPN21Q16825 1174 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 GEN1Q17RS7 908 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 NUDT18Q6ZVK8 323 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PCGF5Q86SE9 256 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 CATSPER3Q86XQ3 398 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PPP4R1Q8TF05 950 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 COPS5Q92905 334 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 MKL1Q969V6 931 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 MRRFQ96E11 262 aaKnown RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 KIF12Q96FN5 646 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 FMO2Q99518 471 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 CALN1Q9BXU9 219 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 CNOT10Q9H9A5 744 aaKnown RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 PFDN4Q9NQP4 134 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 KLHL14Q9P2G3 628 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 UVRAGQ9P2Y5 699 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 STAP1Q9ULZ2 295 aa7.48□□□□□ -1.21
RAB5B-201ENST00000360299 FNDC3AQ9Y2H6 1198 aaKnown RBP7.48□□□□□ -1.21
RAB5B-201ENST00000360299 RASGRP2Q7LDG7 609 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PDIK1LQ8N165 341 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PPFIBP2Q8ND30 876 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 ACAP3Q96P50 834 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SEPT5Q99719 369 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 DDX56Q9NY93 547 aaKnown RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 BCAP29Q9UHQ4 241 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CPSF3Q9UKF6 684 aaKnown RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SLC8A2Q9UPR5 921 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 DOT1LQ8TEK3 1739 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 RTN2O75298 545 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 FTLP02792 175 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 HOXC6P09630 235 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SKIP12755 728 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 GNA15P30679 374 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CLCN3P51790 818 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PLTPP55058 493 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 TLE2Q04725 743 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 GRIK4Q16099 956 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SGSM1Q2NKQ1 1148 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 GKAP1Q5VSY0 366 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 BSPRYQ5W0U4 402 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 NFRKBQ6P4R8 1299 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 GDAP1L1Q96MZ0 367 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CCDC68Q9H2F9 335 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 LMCD1Q9NZU5 365 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 FAM187AA6NFU0 413 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PPP1R3GB7ZBB8 358 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 FGGP02679 453 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 ASGR1P07306 291 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 TOB1P50616 345 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 EMC2Q15006 297 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 FIGNQ5HY92 759 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 RNF219Q5W0B1 726 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PLA2G4FQ68DD2 849 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 DARS2Q6PI48 645 aaKnown RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CACNA2D3Q8IZS8 1091 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 AGPAT1Q99943 283 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 KRT10P13645 584 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 KLRC1P26715 233 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CHRNA3P32297 505 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 CXCR5P32302 372 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 YWHAGP61981 247 aaKnown RBP eCLIP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 RBP5P82980 135 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 IL9RQ01113 521 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 PCNX4Q63HM2 1172 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 RHOT1Q8IXI2 618 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 ZNF564Q8TBZ8 553 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-201ENST00000360299 SAAL1Q96ER3 474 aa7.47□□□□□ -1.21
RAB5B-201ENST00000360299 OSMRQ99650 979 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms