RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 RNF40O75150 1001 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 PARP1P09874 1014 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 MYF5P13349 255 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 SEMG2Q02383 582 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 GRSF1Q12849 480 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 KRTAP21-3Q3LHN1 58 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 PKDCCQ504Y2 493 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 FAM160B1Q5W0V3 765 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 HAUS6Q7Z4H7 955 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 COLGALT2Q8IYK4 626 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 OR2I1PQ8NGU4 316 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 NLRP7Q8WX94 980 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 CLSTN3Q9BQT9 956 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 PIN4Q9Y237 131 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
UBE2D3-205ENST00000350435 ZBTB42B2RXF5 422 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 F8W810 466 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 BACH1O14867 736 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 IPO8O15397 1037 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 CSDE1O75534 798 aaKnown RBP10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 MICAL2O94851 1124 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 SYPP08247 313 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 SERPINF2P08697 491 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 FGRP09769 529 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 HOXD12P35452 270 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 TLE3Q04726 772 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 DMC1Q14565 340 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 PSMD5Q16401 504 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 PRSS36Q5K4E3 855 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 C6orf132Q5T0Z8 1188 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 SMARCC2Q8TAQ2 1214 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 ZSCAN18Q8TBC5 510 aaPredicted RBP10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 TCEAL4Q96EI5 215 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 CORO1BQ9BR76 489 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 TRPV4Q9HBA0 871 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 GTSE1Q9NYZ3 720 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 HSPBP1Q9NZL4 362 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 FBN3Q75N90 2809 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 PTPRDP23468 1912 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 MYO16Q9Y6X6 1858 aa10.13□□□□□ -0.79
UBE2D3-205ENST00000350435 LRRK2Q5S007 2527 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 CACNA1DQ01668 2161 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 KIAA1549LQ6ZVL6 1849 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 HELZP42694 1942 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PLK4O00444 970 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 ARHGAP33O14559 1287 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 MAGEB2O15479 319 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 MAFGO15525 162 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 LRG1P02750 347 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 CT47B1P0C2W7 299 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 KRT10P13645 584 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 TRIM27P14373 513 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 ITGB5P18084 799 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 SFPQP23246 707 aaKnown RBP eCLIP10.12□□□□□ -0.793e-6■□□□□ 10.5
UBE2D3-205ENST00000350435 GPC3P51654 580 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 FCHO2Q0JRZ9 810 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PTPAQ15257 358 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 LYSMD4Q5XG99 296 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 EFCAB12Q6NXP0 572 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 ATG14Q6ZNE5 492 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PDZD4Q76G19 769 aaPredicted RBP10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 RABEPKQ7Z6M1 372 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 HOMER1Q86YM7 354 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 CKAP2LQ8IYA6 745 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 TSTD1Q8NFU3 115 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 ZSWIM3Q96MP5 696 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 SDF4Q9BRK5 362 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 KAT14Q9H8E8 782 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PILRBQ9UKJ0 227 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 AK5Q9Y6K8 562 aa10.12□□□□□ -0.79
UBE2D3-205ENST00000350435 NCANO14594 1321 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 ITPR2Q14571 2701 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 GOLGA8CPA6NN73 597 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 AFPP02771 609 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 PTGER3P43115 390 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 KCNH2Q12809 1159 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 NFATC3Q12968 1075 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 ARHGAP29Q52LW3 1261 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 RTP2Q5QGT7 225 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 C6orf118Q5T5N4 469 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 CYP4A22Q5TCH4 519 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 PEAR1Q5VY43 1037 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 LMBRD2Q68DH5 695 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 DGKHQ86XP1 1220 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 RPLP0P6Q8NHW5 317 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 SETD7Q8WTS6 366 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 CUL5Q93034 780 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 ACDQ96AP0 544 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 GCOM2Q9BZD3 368 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 SLITRK6Q9H5Y7 841 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms