RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CD4P01730 458 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 RPLP2P05387 115 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CLTAP09496 248 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CKBP12277 381 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 UCHL3P15374 230 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 AXLP30530 894 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 GTF2H1P32780 548 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 MBTPS1Q14703 1052 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ZACNQ401N2 412 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 TDRD10Q5VZ19 366 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 KRT39Q6A163 491 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 PHLDB3Q6NSJ2 640 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NOTUMQ6P988 496 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 SLC27A1Q6PCB7 646 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 WDR59Q6PJI9 974 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CNGA4Q8IV77 575 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 EFCAB13Q8IY85 973 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 EHBP1Q8NDI1 1231 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 MNS1Q8NEH6 495 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 PANX2Q96RD6 677 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 CGRRF1Q99675 332 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 PIN4Q9Y237 131 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 NOD1Q9Y239 953 aa15.88■□□□□ 0.13
CXCL12-201ENST00000343575 MKI67P46013 3256 aaKnown RBP15.88■□□□□ 0.13
CXCL12-201ENST00000343575 N4BP1O75113 896 aaKnown RBP15.87■□□□□ 0.13
CXCL12-201ENST00000343575 VNN1O95497 513 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 COL6A1P12109 1028 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 POLR2FP61218 127 aaKnown RBP15.87■□□□□ 0.13
CXCL12-201ENST00000343575 ZBED6P86452 979 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 LPIN1Q14693 890 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 TMEM130Q8N3G9 435 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 DIS3LQ8TF46 1054 aaKnown RBP15.87■□□□□ 0.13
CXCL12-201ENST00000343575 ELMO3Q96BJ8 720 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 FNBP1Q96RU3 617 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 NLRC4Q9NPP4 1024 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 CEP72Q9P209 647 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 HES2Q9Y543 173 aa15.87■□□□□ 0.13
CXCL12-201ENST00000343575 LACTBL1A8MY62 500 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 RPS6KA5O75582 802 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 TNNI1P19237 187 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 GRM5P41594 1212 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 DCAF4L1Q3SXM0 396 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 IQCDQ96DY2 449 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 ADPGKQ9BRR6 497 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 EDEM3Q9BZQ6 932 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 NXF3Q9H4D5 531 aaKnown RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 TRIP11Q15643 1979 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 STX10O60499 249 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 GHRP10912 638 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 GJA8P48165 433 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 POU5F1Q01860 360 aaKnown RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 IQCEQ6IPM2 695 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 USP37Q86T82 979 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 WDR49Q8IV35 697 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 SMG8Q8ND04 991 aaKnown RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 FAM212AQ96EL1 285 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 RPF1Q9H9Y2 349 aaKnown RBP15.86■□□□□ 0.13
CXCL12-201ENST00000343575 ERVK-5Q9HDB9 667 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 PADI3Q9ULW8 664 aa15.86■□□□□ 0.13
CXCL12-201ENST00000343575 LRRC53A6NM62 1247 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 CAND2O75155 1236 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 CD52P31358 61 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 HNRNPH3P31942 346 aaKnown RBP15.85■□□□□ 0.13
CXCL12-201ENST00000343575 NFX1Q12986 1120 aaKnown RBP15.85■□□□□ 0.13
CXCL12-201ENST00000343575 GPNMBQ14956 572 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 MEA1Q16626 185 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 PDXDC1Q6P996 788 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 SLC39A5Q6ZMH5 540 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 ARHGEF19Q8IW93 802 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 FBXL13Q8NEE6 735 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 CCDC51Q96ER9 411 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 CHP1Q99653 195 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 BAG1Q99933 345 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-201ENST00000343575 SEZ6LQ9BYH1 1024 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 GPR88Q9GZN0 384 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 RAB20Q9NX57 234 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 PLAGL2Q9UPG8 496 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 MROH7Q68CQ1 1323 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 CITO14578 2027 aa15.85■□□□□ 0.13
CXCL12-201ENST00000343575 MGEA5O60502 916 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 TADA3O75528 432 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 CST3P01034 146 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-201ENST00000343575 NFICP08651 508 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 ATN1P54259 1190 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-201ENST00000343575 JAM2P57087 298 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 TUBB4BP68371 445 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 ALKAL1Q6UXT8 129 aa15.84■□□□□ 0.13
CXCL12-201ENST00000343575 RRAGAQ7L523 313 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms