RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 NCK2O43639 380 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 FAM189A1O60320 539 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 PRPF40AO75400 957 aaKnown RBP16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 RHOBTB3O94955 611 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 KIF20AO95235 890 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 SMC2O95347 1197 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ADSSP30520 456 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TNFSF9P41273 254 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 STK4Q13043 487 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 BMT2Q1RMZ1 405 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ZBTB41Q5SVQ8 909 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TMEM173Q86WV6 379 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 NELFCDQ8IXH7 590 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ELOA2Q8IYF1 753 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 UROC1Q96N76 676 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TSPAN18Q96SJ8 248 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ENTPD7Q9NQZ7 604 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
TNFRSF12A-202ENST00000341627 CITO14578 2027 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 NCOR1O75376 2440 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TTC26A0AVF1 554 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 H3BQ06 376 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 FSCN2O14926 492 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 XPOTO43592 962 aaKnown RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 HOXD13P35453 343 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ACOT2P49753 483 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 DLX2Q07687 328 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 PNOCQ13519 176 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 NAB2Q15742 525 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 ENOX2Q16206 610 aaKnown RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 KNOP1Q1ED39 458 aaKnown RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TMC7Q7Z402 723 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 VPS52Q8N1B4 723 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 KIAA0895Q8NCT3 520 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 TCF25Q9BQ70 676 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 IGFLR1Q9H665 355 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 MARCH5Q9NX47 278 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 CLDND1Q9NY35 253 aa16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 CGNQ9P2M7 1197 aaKnown RBP16.77■□□□□ 0.28
TNFRSF12A-202ENST00000341627 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 LACTBL1A8MY62 500 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 TNFRSF10AO00220 468 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 LINC01565O15544 149 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 TADA2AO75478 443 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ADAM15Q13444 863 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GOLGA5Q8TBA6 731 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 BCL7CQ8WUZ0 217 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SMARCE1Q969G3 411 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 FAM212AQ96EL1 285 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 KIF12Q96FN5 646 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ZMAT2Q96NC0 199 aaKnown RBP16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GSDMAQ96QA5 445 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 FAM213AQ9BRX8 229 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ASB7Q9H672 318 aa16.76■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GRXCR2A6NFK2 248 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 MEFVO15553 781 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 EXTL3O43909 919 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 IL18RAPO95256 599 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ADRB2P07550 413 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 RPL9P32969 192 aaKnown RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 NRIP1P48552 1158 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 EP400NLQ6ZTU2 488 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 RBM23Q86U06 439 aaKnown RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GPD1LQ8N335 351 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 NOC3LQ8WTT2 800 aaKnown RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SAAL1Q96ER3 474 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 PAAF1Q9BRP4 392 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 GTPBP4Q9BZE4 634 aaKnown RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 PCIF1Q9H4Z3 704 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 KIAA1586Q9HCI6 787 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 AGPAT3Q9NRZ7 376 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ADAM28Q9UKQ2 775 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 UBQLN1Q9UMX0 589 aaKnown RBP16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 DERAQ9Y315 318 aa16.75■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SF3B1O75533 1304 aaKnown RBP eCLIP16.74■□□□□ 0.278e-7■■■■■ 118.7
TNFRSF12A-202ENST00000341627 TGFB1I1O43294 461 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 TBX10O75333 385 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 B3GAT3O94766 335 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SOD2P04179 222 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 CTSAP10619 480 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 CYP3A5P20815 502 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 CA8P35219 290 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 CLCNKBP51801 687 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 SPAG1Q07617 926 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 ELAVL2Q12926 359 aaKnown RBP16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 UPP1Q16831 310 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 PTCRAQ6ISU1 281 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 FUT10Q6P4F1 479 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 CRELD2Q6UXH1 353 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 BRSK2Q8IWQ3 736 aa16.74■□□□□ 0.27
TNFRSF12A-202ENST00000341627 EFHBQ8N7U6 833 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms