RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 BRCC3P46736 316 aa21.3■■□□□ 1
ITGA4-202ENST00000339307 NTHL1P78549 312 aa21.3■■□□□ 1
ITGA4-202ENST00000339307 UPP1Q16831 310 aa21.3■■□□□ 1
ITGA4-202ENST00000339307 AXDND1Q5T1B0 1012 aaPredicted RBP21.3■■□□□ 1
ITGA4-202ENST00000339307 ANKFY1Q9P2R3 1169 aa21.3■■□□□ 1
ITGA4-202ENST00000339307 CDY1Q9Y6F8 540 aa21.3■■□□□ 1
ITGA4-202ENST00000339307 PI15O43692 258 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 GFRA3O60609 400 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 HNRNPA1P09651 372 aaKnown RBP eCLIP21.29■■□□□ 1
ITGA4-202ENST00000339307 FGFR3P22607 806 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 SMTNP53814 917 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 ATP2C1P98194 919 aaPredicted RBP21.29■■□□□ 1
ITGA4-202ENST00000339307 CWF19L1Q69YN2 538 aaKnown RBP21.29■■□□□ 1
ITGA4-202ENST00000339307 NXPE3Q969Y0 559 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 C17orf75Q9HAS0 396 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 SLC38A7Q9NVC3 462 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 ARHGAP28Q9P2N2 729 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 DAXXQ9UER7 740 aaPredicted RBP21.29■■□□□ 1
ITGA4-202ENST00000339307 SMC3Q9UQE7 1217 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 TMEM189-UBE2V1I3L0A0 370 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 MCF2P10911 925 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 NPR3P17342 541 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 ARPP19P56211 112 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 MAPK7Q13164 816 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 MPZL3Q6UWV2 235 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 TAS1R3Q7RTX0 852 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 DDX27Q96GQ7 796 aaKnown RBP21.29■■□□□ 1
ITGA4-202ENST00000339307 ZBTB45Q96K62 511 aaPredicted RBP21.29■■□□□ 1
ITGA4-202ENST00000339307 TIPINQ9BVW5 301 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 PTPRHQ9HD43 1115 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 WNT16Q9UBV4 365 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 NUB1Q9Y5A7 615 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 NUMBLQ9Y6R0 609 aa21.29■■□□□ 1
ITGA4-202ENST00000339307 PODXLO00592 558 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 SRFP11831 508 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 AOC1P19801 751 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 CACNB1Q02641 598 aaPredicted RBP21.28■■□□□ 1
ITGA4-202ENST00000339307 SOX4Q06945 474 aaPredicted RBP21.28■■□□□ 1
ITGA4-202ENST00000339307 RAB33AQ14088 237 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 SEZ6Q53EL9 994 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 ANKS3Q6ZW76 656 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 C3orf58Q8NDZ4 430 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 GPR152Q8TDT2 470 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 PNMA5Q96PV4 448 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 RTP3Q9BQQ7 232 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 MTRRQ9UBK8 725 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 KCNG1Q9UIX4 513 aa21.28■■□□□ 1
ITGA4-202ENST00000339307 TRIP11Q15643 1979 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 NPHP3-ACAD11A0A0J9YXS1 232 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 PLA2G4BP0C869 781 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 PLS3P13797 630 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 GUCY2CP25092 1073 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 DHX8Q14562 1220 aaKnown RBP21.27■■□□□ 1
ITGA4-202ENST00000339307 SYT2Q8N9I0 419 aaPredicted RBP21.27■■□□□ 1
ITGA4-202ENST00000339307 RASSF8Q8NHQ8 419 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 BICD1Q96G01 975 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 SNX27Q96L92 541 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 ZMAT2Q96NC0 199 aaKnown RBP21.27■■□□□ 1
ITGA4-202ENST00000339307 HCFC1R1Q9NWW0 138 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 CDH7Q9ULB5 785 aa21.27■■□□□ 1
ITGA4-202ENST00000339307 KRBA1A5PL33 1030 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 CD2BP2O95400 341 aaKnown RBP21.26■□□□□ 0.99
ITGA4-202ENST00000339307 ELF1P32519 619 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 UVSSAQ2YD98 709 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 CD300LGQ6UXG3 332 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 ALKAL1Q6UXT8 129 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 RSPO2Q6UXX9 243 aaPredicted RBP21.26■□□□□ 0.99
ITGA4-202ENST00000339307 C18orf25Q96B23 403 aaPredicted RBP21.26■□□□□ 0.99
ITGA4-202ENST00000339307 ZFP37Q9Y6Q3 630 aaPredicted RBP21.26■□□□□ 0.99
ITGA4-202ENST00000339307 VWA8A3KMH1 1905 aa21.26■□□□□ 0.99
ITGA4-202ENST00000339307 PAPLNO95428 1278 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 HOXA9P31269 272 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 HTR4Q13639 388 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 NOLC1Q14978 699 aaKnown RBP eCLIP21.25■□□□□ 0.99
ITGA4-202ENST00000339307 SPECC1Q5M775 1068 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 LARP1BQ659C4 914 aaKnown RBP21.25■□□□□ 0.99
ITGA4-202ENST00000339307 PARM1Q6UWI2 310 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 ITFG1Q8TB96 612 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 SPIRE2Q8WWL2 714 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 FGF13Q92913 245 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 CALML4Q96GE6 196 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 NTPCRQ9BSD7 190 aaKnown RBP21.25■□□□□ 0.99
ITGA4-202ENST00000339307 BACE2Q9Y5Z0 518 aa21.25■□□□□ 0.99
ITGA4-202ENST00000339307 ANHXE9PGG2 379 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 PRRG1O14668 218 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 CLDN3O15551 220 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 TOM1L1O75674 476 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 PROZP22891 400 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 MCM4P33991 863 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 UBA7P41226 1012 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 MCM2P49736 904 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 SLC12A3P55017 1021 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 PABPC1LQ4VXU2 614 aaKnown RBP21.24■□□□□ 0.99
ITGA4-202ENST00000339307 XKR4Q5GH76 650 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 VARS2Q5ST30 1063 aaKnown RBP21.24■□□□□ 0.99
ITGA4-202ENST00000339307 HYIQ5T013 277 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 ARL6IP4Q66PJ3 421 aaKnown RBP21.24■□□□□ 0.99
ITGA4-202ENST00000339307 DTWD2Q8NBA8 298 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 TMEM161BQ8NDZ6 487 aa21.24■□□□□ 0.99
ITGA4-202ENST00000339307 ING5Q8WYH8 240 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms