RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YHR180WP38868 163 aa-0.39□□□□□ -2.47
snR56snR56 TOS8P53147 276 aa-0.39□□□□□ -2.47
snR56snR56 VMA11P32842 164 aa-0.41□□□□□ -2.48
snR56snR56 AIM20P40451 204 aa-0.41□□□□□ -2.48
snR56snR56 YGL185CP53100 379 aa-0.41□□□□□ -2.48
snR56snR56 RIO2P40160 425 aaKnown RBP-0.42□□□□□ -2.48
snR56snR56 CDC40P40968 455 aaPredicted RBP-0.42□□□□□ -2.48
snR56snR56 JHD2P47156 728 aaPredicted RBP-0.42□□□□□ -2.48
snR56snR56 NBP35P52920 328 aa-0.42□□□□□ -2.48
snR56snR56 MSB2P32334 1306 aa-0.42□□□□□ -2.48
snR56snR56 RPL9AP05738 191 aaKnown RBP-0.43□□□□□ -2.48
snR56snR56 CAR2P07991 424 aaKnown RBP-0.43□□□□□ -2.48
snR56snR56 RPL9BP51401 191 aaKnown RBP-0.43□□□□□ -2.48
snR56snR56 ARR2Q06597 130 aa-0.43□□□□□ -2.48
snR56snR56 RNA15P25299 296 aaPredicted RBP-0.44□□□□□ -2.48
snR56snR56 PBN1P25580 416 aa-0.44□□□□□ -2.48
snR56snR56 AGP3P43548 558 aa-0.44□□□□□ -2.48
snR56snR56 SWS2P53937 143 aa-0.44□□□□□ -2.48
snR56snR56 ILV1P00927 576 aaKnown RBP-0.45□□□□□ -2.48
snR56snR56 TMA19P35691 167 aaKnown RBP-0.45□□□□□ -2.48
snR56snR56 HEK2P38199 381 aaKnown RBP RIP-Chip data-0.45□□□□□ -2.48not detected
snR56snR56 PSY3Q12318 242 aa-0.45□□□□□ -2.48
snR56snR56 MSW1P04803 379 aa-0.46□□□□□ -2.48
snR56snR56 RSR1P13856 272 aa-0.46□□□□□ -2.48
snR56snR56 ICL1P28240 557 aaPredicted RBP-0.46□□□□□ -2.48
snR56snR56 SFH1Q06168 426 aa-0.46□□□□□ -2.48
snR56snR56 GPN3Q06543 272 aa-0.46□□□□□ -2.48
snR56snR56 SIR4P11978 1358 aa-0.46□□□□□ -2.48
snR56snR56 YGL034CP53186 121 aa-0.47□□□□□ -2.48
snR56snR56 YBL008W-AQ3E821 79 aa-0.47□□□□□ -2.48
snR56snR56 TDA11P38854 504 aa-0.48□□□□□ -2.49
snR56snR56 YLR179CQ06252 201 aaKnown RBP-0.48□□□□□ -2.49
snR56snR56 ACC1Q00955 2233 aaKnown RBP-0.49□□□□□ -2.49
snR56snR56 YLR462WO13556 202 aa-0.49□□□□□ -2.49
snR56snR56 RPP0P05317 312 aaKnown RBP-0.49□□□□□ -2.49
snR56snR56 CDC37P06101 506 aaKnown RBP-0.49□□□□□ -2.49
snR56snR56 GRX2P17695 143 aaKnown RBP-0.49□□□□□ -2.49
snR56snR56 YEL075CP39972 122 aa-0.49□□□□□ -2.49
snR56snR56 SOK1P40317 901 aa-0.49□□□□□ -2.49
snR56snR56 RIB4P50861 169 aaPredicted RBP-0.49□□□□□ -2.49
snR56snR56 MSA1Q08471 629 aa-0.49□□□□□ -2.49
snR56snR56 APE4P38821 490 aa-0.5□□□□□ -2.49
snR56snR56 END3P39013 349 aa-0.5□□□□□ -2.49
snR56snR56 MSA2P36157 363 aa-0.51□□□□□ -2.49
snR56snR56 BIG1P38813 335 aa-0.51□□□□□ -2.49
snR56snR56 YER189WP40104 122 aa-0.51□□□□□ -2.49
snR56snR56 SPP2Q02521 185 aa-0.51□□□□□ -2.49
snR56snR56 BER1Q06688 274 aaKnown RBP-0.51□□□□□ -2.49
snR56snR56 HEM25Q07534 307 aa-0.51□□□□□ -2.49
snR56snR56 YNL146C-AQ3E7Z1 64 aa-0.51□□□□□ -2.49
snR56snR56 FZF1P32805 299 aa-0.52□□□□□ -2.49
snR56snR56 LOH1P47055 219 aa-0.52□□□□□ -2.49
snR56snR56 TIM21P53220 239 aa-0.52□□□□□ -2.49
snR56snR56 CPD1P53314 239 aa-0.52□□□□□ -2.49
snR56snR56 CDC14Q00684 551 aa-0.52□□□□□ -2.49
snR56snR56 VBA1Q04301 562 aa-0.52□□□□□ -2.49
snR56snR56 MNN9P39107 395 aaKnown RBP-0.53□□□□□ -2.49
snR56snR56 TIR3P40552 269 aa-0.53□□□□□ -2.49
snR56snR56 NAS2P40555 220 aa-0.53□□□□□ -2.49
snR56snR56 LCL2Q08045 131 aa-0.53□□□□□ -2.49
snR56snR56 FAR8Q05040 523 aa-0.54□□□□□ -2.5
snR56snR56 RRS1Q08746 203 aaKnown RBP-0.54□□□□□ -2.5
snR56snR56 RPL33BP41056 107 aaKnown RBP-0.55□□□□□ -2.5
snR56snR56 YLR297WQ05899 129 aa-0.55□□□□□ -2.5
snR56snR56 YLR030WQ07967 263 aa-0.55□□□□□ -2.5
snR56snR56 PER33Q12144 273 aa-0.55□□□□□ -2.5
snR56snR56 MRPL23Q12487 163 aaPredicted RBP-0.55□□□□□ -2.5
snR56snR56 PET18P25362 215 aa-0.56□□□□□ -2.5
snR56snR56 BOL2P53082 120 aa-0.56□□□□□ -2.5
snR56snR56 ANT1Q06497 328 aa-0.56□□□□□ -2.5
snR56snR56 YOL160WQ08321 113 aa-0.56□□□□□ -2.5
snR56snR56 SWI1P09547 1314 aa-0.57□□□□□ -2.5
snR56snR56 POF1P25576 258 aa-0.57□□□□□ -2.5
snR56snR56 HIS2P38635 335 aa-0.57□□□□□ -2.5
snR56snR56 TPO4Q12256 659 aa-0.57□□□□□ -2.5
snR56snR56 YHR212W-AP0CX91 67 aa-0.58□□□□□ -2.5
snR56snR56 GPI12P23797 304 aa-0.58□□□□□ -2.5
snR56snR56 ERG24P32462 438 aaKnown RBP-0.58□□□□□ -2.5
snR56snR56 YGL159WP53110 370 aa-0.58□□□□□ -2.5
snR56snR56 MPP6P53725 186 aaPredicted RBP-0.58□□□□□ -2.5
snR56snR56 TVP38P36164 337 aa-0.59□□□□□ -2.5
snR56snR56 GAA1P39012 614 aa-0.59□□□□□ -2.5
snR56snR56 GTR2P53290 341 aa-0.59□□□□□ -2.5
snR56snR56 MEI4P29467 408 aa-0.6□□□□□ -2.51
snR56snR56 SMI1P32566 505 aa-0.6□□□□□ -2.51
snR56snR56 SSO2P39926 295 aa-0.6□□□□□ -2.51
snR56snR56 VOA1P53262 265 aa-0.6□□□□□ -2.51
snR56snR56 MNT4P53745 580 aa-0.6□□□□□ -2.51
snR56snR56 ARV1Q06541 321 aa-0.6□□□□□ -2.51
snR56snR56 SNA3P14359 133 aa-0.61□□□□□ -2.51
snR56snR56 SAR1P20606 190 aaKnown RBP-0.61□□□□□ -2.51
snR56snR56 RPC25P35718 212 aa-0.61□□□□□ -2.51
snR56snR56 FZO1P38297 855 aa-0.61□□□□□ -2.51
snR56snR56 YNL217WP40152 326 aa-0.61□□□□□ -2.51
snR56snR56 STH1P32597 1359 aa-0.61□□□□□ -2.51
snR56snR56 SSA3P09435 649 aaKnown RBP-0.62□□□□□ -2.51
snR56snR56 SRY1P36007 326 aa-0.62□□□□□ -2.51
snR56snR56 FIS1P40515 155 aa-0.62□□□□□ -2.51
snR56snR56 VAC14Q06708 880 aa-0.62□□□□□ -2.51
snR56snR56 YFL065CP43539 102 aa-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms