RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C APM1Q00776 475 aaPredicted RBP5.37□□□□□ -1.55
VPS4YPR173C ACS1Q01574 713 aa5.37□□□□□ -1.55
VPS4YPR173C REC102Q02721 264 aa5.37□□□□□ -1.55
VPS4YPR173C MTQ2Q03920 221 aaPredicted RBP5.37□□□□□ -1.55
VPS4YPR173C ORT1Q12375 292 aa5.37□□□□□ -1.55
VPS4YPR173C PET20Q99373 253 aa5.37□□□□□ -1.55
VPS4YPR173C TPI1P00942 248 aaKnown RBP5.36□□□□□ -1.55
VPS4YPR173C RPB3P16370 318 aaKnown RBP5.36□□□□□ -1.55
VPS4YPR173C ERG4P25340 473 aa5.36□□□□□ -1.55
VPS4YPR173C PET18P25362 215 aa5.36□□□□□ -1.55
VPS4YPR173C MGR1P25573 417 aa5.36□□□□□ -1.55
VPS4YPR173C PBN1P25580 416 aa5.36□□□□□ -1.55
VPS4YPR173C SRB5P32585 307 aa5.36□□□□□ -1.55
VPS4YPR173C FMT1P32785 401 aa5.36□□□□□ -1.55
VPS4YPR173C YKL071WP36086 256 aa5.36□□□□□ -1.55
VPS4YPR173C MRPL37P36532 105 aa5.36□□□□□ -1.55
VPS4YPR173C SDH4P37298 181 aa5.36□□□□□ -1.55
VPS4YPR173C LSM4P40070 187 aaKnown RBP5.36□□□□□ -1.55
VPS4YPR173C RPL13BP40212 199 aaKnown RBP5.36□□□□□ -1.55
VPS4YPR173C VMA21P41806 77 aa5.36□□□□□ -1.55
VPS4YPR173C YJR056CP47115 236 aa5.36□□□□□ -1.55
VPS4YPR173C OCA1P50946 238 aaPredicted RBP5.36□□□□□ -1.55
VPS4YPR173C YGR012WP53206 393 aa5.36□□□□□ -1.55
VPS4YPR173C SNO2P53823 222 aa5.36□□□□□ -1.55
VPS4YPR173C GPI15P53961 229 aa5.36□□□□□ -1.55
VPS4YPR173C MEH1Q02205 184 aa5.36□□□□□ -1.55
VPS4YPR173C SYM1Q06563 197 aa5.36□□□□□ -1.55
VPS4YPR173C YDL086WQ07505 273 aa5.36□□□□□ -1.55
VPS4YPR173C RDR1Q08904 546 aa5.36□□□□□ -1.55
VPS4YPR173C PRS5Q12265 496 aaKnown RBP5.36□□□□□ -1.55
VPS4YPR173C DCN1Q12395 269 aa5.36□□□□□ -1.55
VPS4YPR173C RPL13AQ12690 199 aaPredicted RBP5.36□□□□□ -1.55
VPS4YPR173C YLR146W-AQ2V2P1 62 aa5.36□□□□□ -1.55
VPS4YPR173C SEC59P20048 519 aa5.35□□□□□ -1.55
VPS4YPR173C ADH7P25377 361 aa5.35□□□□□ -1.55
VPS4YPR173C MDH3P32419 343 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
VPS4YPR173C DCG1P32460 244 aa5.35□□□□□ -1.55
VPS4YPR173C CLB6P32943 380 aa5.35□□□□□ -1.55
VPS4YPR173C MSN4P33749 630 aa5.35□□□□□ -1.55
VPS4YPR173C CPR5P35176 225 aa5.35□□□□□ -1.55
VPS4YPR173C SSS1P35179 80 aa5.35□□□□□ -1.55
VPS4YPR173C SPT10P35208 640 aa5.35□□□□□ -1.55
VPS4YPR173C GPX1P36014 167 aa5.35□□□□□ -1.55
VPS4YPR173C MRPL4P36517 319 aa5.35□□□□□ -1.55
VPS4YPR173C TAE1P38340 232 aa5.35□□□□□ -1.55
VPS4YPR173C YPT31P38555 223 aaKnown RBP5.35□□□□□ -1.55
VPS4YPR173C SLM1P40485 686 aa5.35□□□□□ -1.55
VPS4YPR173C AIM24P47127 394 aa5.35□□□□□ -1.55
VPS4YPR173C BXI1P48558 297 aa5.35□□□□□ -1.55
VPS4YPR173C PKP2P53170 491 aa5.35□□□□□ -1.55
VPS4YPR173C ERV14P53173 138 aa5.35□□□□□ -1.55
VPS4YPR173C SCW4P53334 386 aaKnown RBP5.35□□□□□ -1.55
VPS4YPR173C YMR253CQ04835 414 aa5.35□□□□□ -1.55
VPS4YPR173C MRPL51Q06090 140 aaPredicted RBP5.35□□□□□ -1.55
VPS4YPR173C RRT7Q07829 113 aa5.35□□□□□ -1.55
VPS4YPR173C PML1Q07930 204 aaPredicted RBP5.35□□□□□ -1.55
VPS4YPR173C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
VPS4YPR173C RAD28Q12021 506 aa5.35□□□□□ -1.55
VPS4YPR173C POF1P25576 258 aa5.34□□□□□ -1.55
VPS4YPR173C SNC2P33328 115 aa5.34□□□□□ -1.55
VPS4YPR173C POP8P38208 133 aa5.34□□□□□ -1.55
VPS4YPR173C ANS1P38832 159 aa5.34□□□□□ -1.55
VPS4YPR173C CHS7P38843 316 aa5.34□□□□□ -1.55
VPS4YPR173C DLS1P40366 167 aa5.34□□□□□ -1.55
VPS4YPR173C UBP8P50102 471 aa5.34□□□□□ -1.55
VPS4YPR173C MNN10P50108 393 aaKnown RBP5.34□□□□□ -1.55
VPS4YPR173C YIP4P53093 235 aa5.34□□□□□ -1.55
VPS4YPR173C BSC5P53755 489 aa5.34□□□□□ -1.55
VPS4YPR173C YLR152CP54072 576 aa5.34□□□□□ -1.55
VPS4YPR173C TMA23Q03525 211 aa5.34□□□□□ -1.55
VPS4YPR173C INP1Q03694 420 aa5.34□□□□□ -1.55
VPS4YPR173C YML018CQ03730 393 aa5.34□□□□□ -1.55
VPS4YPR173C HNT1Q04344 158 aaKnown RBP5.34□□□□□ -1.55
VPS4YPR173C YML096WQ04489 525 aa5.34□□□□□ -1.55
VPS4YPR173C SMA2Q04658 369 aa5.34□□□□□ -1.55
VPS4YPR173C COX19Q3E731 98 aa5.34□□□□□ -1.55
VPS4YPR173C MEX67Q99257 599 aaKnown RBP5.34□□□□□ -1.55
VPS4YPR173C YLR358CO13565 187 aa5.33□□□□□ -1.56
VPS4YPR173C FPR1P20081 114 aaKnown RBP5.33□□□□□ -1.56
VPS4YPR173C SCL1P21243 252 aaKnown RBP5.33□□□□□ -1.56
VPS4YPR173C GAS1P22146 559 aaKnown RBP5.33□□□□□ -1.56
VPS4YPR173C TRS65P32893 560 aa5.33□□□□□ -1.56
VPS4YPR173C SLC1P33333 303 aa5.33□□□□□ -1.56
VPS4YPR173C YNK1P36010 153 aaKnown RBP5.33□□□□□ -1.56
VPS4YPR173C SRP102P36057 244 aaPredicted RBP5.33□□□□□ -1.56
VPS4YPR173C AUR1P36107 401 aaPredicted RBP5.33□□□□□ -1.56
VPS4YPR173C RIB5P38145 238 aa5.33□□□□□ -1.56
VPS4YPR173C OSW5P40219 148 aa5.33□□□□□ -1.56
VPS4YPR173C PAU15P40585 124 aa5.33□□□□□ -1.56
VPS4YPR173C NIT2P47016 307 aa5.33□□□□□ -1.56
VPS4YPR173C NIT3P49954 291 aa5.33□□□□□ -1.56
VPS4YPR173C UFD1P53044 361 aa5.33□□□□□ -1.56
VPS4YPR173C NPY1P53164 384 aa5.33□□□□□ -1.56
VPS4YPR173C LEE1Q02799 301 aaKnown RBP5.33□□□□□ -1.56
VPS4YPR173C RSM10Q03201 203 aa5.33□□□□□ -1.56
VPS4YPR173C HOF1Q05080 669 aa5.33□□□□□ -1.56
VPS4YPR173C MRX8Q05473 314 aa5.33□□□□□ -1.56
VPS4YPR173C HEM25Q07534 307 aa5.33□□□□□ -1.56
VPS4YPR173C PFA4Q12006 378 aa5.33□□□□□ -1.56
VPS4YPR173C AIM45Q12480 344 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms