RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C CWP1P28319 239 aa2.26□□□□□ -2.05
RPC40YPR110C CAM1P29547 415 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C ERG2P32352 222 aa2.26□□□□□ -2.05
RPC40YPR110C CAT2P32796 670 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C AST1P35183 429 aa2.26□□□□□ -2.05
RPC40YPR110C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RPC40YPR110C PRS4P38063 326 aaPredicted RBP2.26□□□□□ -2.05
RPC40YPR110C HMT1P38074 348 aa2.26□□□□□ -2.05
RPC40YPR110C MRX3P38172 270 aa2.26□□□□□ -2.05
RPC40YPR110C DSN1P40568 576 aa2.26□□□□□ -2.05
RPC40YPR110C RPL10P41805 221 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C PFS2P42841 465 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C RPL4BP49626 362 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C MAL13P53338 473 aa2.26□□□□□ -2.05
RPC40YPR110C YNL095CP53932 642 aa2.26□□□□□ -2.05
RPC40YPR110C YDR222WQ04925 415 aa2.26□□□□□ -2.05
RPC40YPR110C YLR173WQ06247 608 aa2.26□□□□□ -2.05
RPC40YPR110C SDO1Q07953 250 aaKnown RBP2.26□□□□□ -2.05
RPC40YPR110C BTS1Q12051 335 aa2.26□□□□□ -2.05
RPC40YPR110C YOL107WQ12239 342 aa2.26□□□□□ -2.05
RPC40YPR110C PRR2Q12310 699 aa2.26□□□□□ -2.05
RPC40YPR110C SNF8Q12483 233 aa2.26□□□□□ -2.05
RPC40YPR110C LYS2P07702 1392 aa2.25□□□□□ -2.05
RPC40YPR110C RAD3P06839 778 aa2.25□□□□□ -2.05
RPC40YPR110C COS2P0CX12 379 aa2.25□□□□□ -2.05
RPC40YPR110C COS3P0CX13 379 aa2.25□□□□□ -2.05
RPC40YPR110C MRP1P10662 321 aaKnown RBP2.25□□□□□ -2.05
RPC40YPR110C YAK1P14680 807 aa2.25□□□□□ -2.05
RPC40YPR110C TRM7P38238 310 aaKnown RBP2.25□□□□□ -2.05
RPC40YPR110C PHO89P38361 574 aa2.25□□□□□ -2.05
RPC40YPR110C ECM14P38836 430 aa2.25□□□□□ -2.05
RPC40YPR110C SUR2P38992 349 aa2.25□□□□□ -2.05
RPC40YPR110C YJR012CP47087 207 aa2.25□□□□□ -2.05
RPC40YPR110C CPR7P47103 393 aa2.25□□□□□ -2.05
RPC40YPR110C OST3P48439 350 aa2.25□□□□□ -2.05
RPC40YPR110C SWT21P53873 357 aaPredicted RBP2.25□□□□□ -2.05
RPC40YPR110C SRL4Q03085 281 aa2.25□□□□□ -2.05
RPC40YPR110C MED4Q12343 284 aa2.25□□□□□ -2.05
RPC40YPR110C ZWF1P11412 505 aaKnown RBP2.24□□□□□ -2.05
RPC40YPR110C BIG1P38813 335 aa2.24□□□□□ -2.05
RPC40YPR110C YIL059CP40520 121 aa2.24□□□□□ -2.05
RPC40YPR110C RSM27P53305 110 aa2.24□□□□□ -2.05
RPC40YPR110C TIM11P81449 96 aaPredicted RBP2.24□□□□□ -2.05
RPC40YPR110C DXO1Q06349 442 aa2.24□□□□□ -2.05
RPC40YPR110C YPR195CQ06594 109 aa2.24□□□□□ -2.05
RPC40YPR110C YPR063CQ12160 140 aa2.24□□□□□ -2.05
RPC40YPR110C ATG31Q12421 196 aa2.24□□□□□ -2.05
RPC40YPR110C VPS3P23643 1011 aa2.23□□□□□ -2.05
RPC40YPR110C QRI5P32344 111 aa2.23□□□□□ -2.05
RPC40YPR110C CSG2P35206 410 aa2.23□□□□□ -2.05
RPC40YPR110C YBL081WP38180 368 aaKnown RBP2.23□□□□□ -2.05
RPC40YPR110C YHL049CP38722 271 aa2.23□□□□□ -2.05
RPC40YPR110C SPL2P38839 148 aa2.23□□□□□ -2.05
RPC40YPR110C SPT8P38915 602 aa2.23□□□□□ -2.05
RPC40YPR110C FMC1P40491 155 aa2.23□□□□□ -2.05
RPC40YPR110C RPE1P46969 238 aa2.23□□□□□ -2.05
RPC40YPR110C HSH155P49955 971 aaKnown RBP2.23□□□□□ -2.05
RPC40YPR110C YNL134CP53912 376 aaKnown RBP2.23□□□□□ -2.05
RPC40YPR110C CSM4Q08955 156 aa2.23□□□□□ -2.05
RPC40YPR110C RPS23AP0CX29 145 aaKnown RBP2.22□□□□□ -2.05
RPC40YPR110C RPS23BP0CX30 145 aa2.22□□□□□ -2.05
RPC40YPR110C TKL2P33315 681 aa2.22□□□□□ -2.05
RPC40YPR110C SMB1P40018 196 aaKnown RBP2.22□□□□□ -2.05
RPC40YPR110C ECO1P43605 281 aa2.22□□□□□ -2.05
RPC40YPR110C BNA6P43619 295 aa2.22□□□□□ -2.05
RPC40YPR110C BUD13P46947 266 aaPredicted RBP2.22□□□□□ -2.05
RPC40YPR110C GLG2P47011 380 aa2.22□□□□□ -2.05
RPC40YPR110C NUP84P52891 726 aa2.22□□□□□ -2.05
RPC40YPR110C NBP1P52919 319 aaPredicted RBP2.22□□□□□ -2.05
RPC40YPR110C SLX9P53251 210 aaPredicted RBP2.22□□□□□ -2.05
RPC40YPR110C AAH1P53909 347 aa2.22□□□□□ -2.05
RPC40YPR110C EBS1Q03466 884 aaKnown RBP2.22□□□□□ -2.05
RPC40YPR110C BOP2Q06150 570 aa2.22□□□□□ -2.05
RPC40YPR110C MSH5Q12175 901 aa2.22□□□□□ -2.05
RPC40YPR110C RFM1Q12192 310 aa2.22□□□□□ -2.05
RPC40YPR110C YOR029WQ12243 111 aa2.22□□□□□ -2.05
RPC40YPR110C PRM7Q12459 698 aa2.22□□□□□ -2.05
RPC40YPR110C RNA15P25299 296 aaPredicted RBP2.21□□□□□ -2.06
RPC40YPR110C EHD3P28817 500 aa2.21□□□□□ -2.06
RPC40YPR110C HOM6P31116 359 aaKnown RBP2.21□□□□□ -2.06
RPC40YPR110C IME2P32581 645 aa2.21□□□□□ -2.06
RPC40YPR110C YHR045WP38775 560 aa2.21□□□□□ -2.06
RPC40YPR110C SPO73P40031 143 aa2.21□□□□□ -2.06
RPC40YPR110C YPL039WQ03080 316 aa2.21□□□□□ -2.06
RPC40YPR110C KRE28Q04431 385 aa2.21□□□□□ -2.06
RPC40YPR110C YBL112CQ3E7Y4 105 aa2.21□□□□□ -2.06
RPC40YPR110C ISD11Q6Q560 94 aa2.21□□□□□ -2.06
RPC40YPR110C PMD1P32634 1753 aa2.21□□□□□ -2.06
RPC40YPR110C DUR1,2P32528 1835 aaKnown RBP2.2□□□□□ -2.06
RPC40YPR110C HIS3P06633 220 aa2.2□□□□□ -2.06
RPC40YPR110C POX1P13711 748 aa2.2□□□□□ -2.06
RPC40YPR110C JEN1P36035 616 aa2.2□□□□□ -2.06
RPC40YPR110C HEK2P38199 381 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
RPC40YPR110C ARN2P38724 620 aa2.2□□□□□ -2.06
RPC40YPR110C THO1P40040 218 aaKnown RBP2.2□□□□□ -2.06
RPC40YPR110C AGX1P43567 385 aa2.2□□□□□ -2.06
RPC40YPR110C MIG2P53035 382 aa2.2□□□□□ -2.06
RPC40YPR110C FCF1Q05498 189 aaPredicted RBP2.2□□□□□ -2.06
RPC40YPR110C YLR283WQ05867 314 aa2.2□□□□□ -2.06
RPC40YPR110C ATG17Q06410 417 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms