RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN7	YPR108W	BSC5	P53755	489 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	ELA1	P53861	379 aa	Predicted RBP	5.21	□□□□□ -1.58
RPN7	YPR108W	MRPL19	P53875	158 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	RSM10	Q03201	203 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	NGL2	Q03264	515 aa	Known RBP	5.21	□□□□□ -1.58
RPN7	YPR108W	YML018C	Q03730	393 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	NUP53	Q03790	475 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	CAB5	Q03941	241 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	VBA4	Q04602	768 aa	Known RBP	5.21	□□□□□ -1.58
RPN7	YPR108W	COA4	Q05809	96 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	CTS2	Q06350	511 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	INP53	Q12271	1107 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	PET20	Q99373	253 aa		5.21	□□□□□ -1.58
RPN7	YPR108W	PHO2	P07269	559 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	STE18	P18852	110 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	OLE1	P21147	510 aa	Known RBP	5.2	□□□□□ -1.58
RPN7	YPR108W	PRE9	P23638	258 aa	Known RBP	5.2	□□□□□ -1.58
RPN7	YPR108W	PET18	P25362	215 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	TCA17	P32613	152 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	YBL010C	P32788	280 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	PDC2	P32896	925 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	FLO10	P36170	1169 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	ECM31	P38122	312 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	SEC24	P40482	926 aa	Known RBP	5.2	□□□□□ -1.58
RPN7	YPR108W	OKP1	P53298	406 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	HOL1	P53389	586 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	CWC25	P53854	179 aa	Known RBP	5.2	□□□□□ -1.58
RPN7	YPR108W	ACT1	P60010	375 aa	Known RBP	5.2	□□□□□ -1.58
RPN7	YPR108W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
RPN7	YPR108W	HLR1	Q04429	423 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	MDM30	Q05930	598 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	MCH4	Q08268	501 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	YOR376W	Q08900	122 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	GRE1	Q08969	168 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	YRM1	Q12340	786 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	MED4	Q12343	284 aa		5.2	□□□□□ -1.58
RPN7	YPR108W	PUT1	P09368	476 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	RPL35A	P0CX84	120 aa	Known RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	RPL35B	P0CX85	120 aa	Known RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	ZRC1	P20107	442 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	RPB8	P20436	146 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	SEC62	P21825	274 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	CPR2	P23285	205 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	EMP70	P32802	667 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	DUT1	P33317	147 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	PPZ2	P33329	710 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	MRPL27	P36526	146 aa	Predicted RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	TCM62	P38228	572 aa	Known RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
RPN7	YPR108W	LSM12	P38828	187 aa	Known RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	ASP1	P38986	381 aa	Predicted RBP	5.19	□□□□□ -1.58
RPN7	YPR108W	UME6	P39001	836 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	SSO2	P39926	295 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	YNL195C	P40168	261 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	YIL152W	P40455	235 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	IRC24	P40580	263 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	YGR126W	P53274	230 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	SDC1	Q03323	175 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	TDA6	Q06466	467 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	MCT1	Q12283	360 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	FMP16	Q12497	93 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	YPR053C	Q6Q5F3	151 aa		5.19	□□□□□ -1.58
RPN7	YPR108W	FAB1	P34756	2278 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	OPI3	P05375	206 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	RPL30	P14120	105 aa	Known RBP	5.18	□□□□□ -1.58
RPN7	YPR108W	YCP4	P25349	247 aa	Known RBP	5.18	□□□□□ -1.58
RPN7	YPR108W	MXR2	P25566	168 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	LDS1	P31379	325 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
RPN7	YPR108W	YKL069W	P36088	180 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YHR210C	P38893	341 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	GCV3	P39726	170 aa	Predicted RBP	5.18	□□□□□ -1.58
RPN7	YPR108W	HAM1	P47119	197 aa	Known RBP	5.18	□□□□□ -1.58
RPN7	YPR108W	PKP2	P53170	491 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YGR042W	P53227	271 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YGR066C	P53242	292 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	ANT1	Q06497	328 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YOL024W	Q08172	172 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YLR146W-A	Q2V2P1	62 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	YDR034W-B	Q6Q5X2	51 aa		5.18	□□□□□ -1.58
RPN7	YPR108W	CBP6	P07253	162 aa	Predicted RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	ARO3	P14843	370 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	CKA1	P15790	372 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	YCR006C	P25350	157 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	TRR1	P29509	319 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	VMA5	P31412	392 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	MRP20	P32387	263 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	LNP1	P38878	278 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	PZF1	P39933	429 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	PIC2	P40035	300 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	GPP1	P41277	250 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	YGR210C	P42942	411 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	SNO3	P43544	222 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	MOB2	P43563	287 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	YJR011C	P47086	261 aa	Predicted RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	LYS20	P48570	428 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	OCA1	P50946	238 aa	Predicted RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	PNC1	P53184	216 aa	Known RBP	5.17	□□□□□ -1.58
RPN7	YPR108W	FMP48	P53233	369 aa		5.17	□□□□□ -1.58
RPN7	YPR108W	MPA43	P53583	542 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms