RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C AEP1P32493 518 aa2.81□□□□□ -1.96
LCB4YOR171C MSN2P33748 704 aa2.81□□□□□ -1.96
LCB4YOR171C KTI12P34253 313 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C ROT2P38138 954 aa2.81□□□□□ -1.96
LCB4YOR171C ECM33P38248 429 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C YBR220CP38318 560 aa2.81□□□□□ -1.96
LCB4YOR171C YBR285WP38354 144 aa2.81□□□□□ -1.96
LCB4YOR171C AIM18P38884 321 aa2.81□□□□□ -1.96
LCB4YOR171C VMA7P39111 118 aa2.81□□□□□ -1.96
LCB4YOR171C GLE2P40066 365 aa2.81□□□□□ -1.96
LCB4YOR171C SER33P40510 469 aa2.81□□□□□ -1.96
LCB4YOR171C ERJ5P43613 295 aaPredicted RBP2.81□□□□□ -1.96
LCB4YOR171C PYK2P52489 506 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C MST27P53176 234 aa2.81□□□□□ -1.96
LCB4YOR171C COG7P53195 279 aa2.81□□□□□ -1.96
LCB4YOR171C CDH1P53197 566 aa2.81□□□□□ -1.96
LCB4YOR171C CAF40P53829 373 aa2.81□□□□□ -1.96
LCB4YOR171C IMP4P53941 290 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C APS2Q00381 147 aa2.81□□□□□ -1.96
LCB4YOR171C ELP3Q02908 557 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C YDR124WQ04608 324 aa2.81□□□□□ -1.96
LCB4YOR171C INM2Q05533 292 aa2.81□□□□□ -1.96
LCB4YOR171C PEX30Q06169 523 aa2.81□□□□□ -1.96
LCB4YOR171C YDL218WQ07629 317 aa2.81□□□□□ -1.96
LCB4YOR171C HRD1Q08109 551 aa2.81□□□□□ -1.96
LCB4YOR171C RRS1Q08746 203 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C MMT2Q08970 484 aa2.81□□□□□ -1.96
LCB4YOR171C MDM32Q12171 622 aa2.81□□□□□ -1.96
LCB4YOR171C ATG34Q12292 412 aa2.81□□□□□ -1.96
LCB4YOR171C HRT3Q12347 344 aa2.81□□□□□ -1.96
LCB4YOR171C IPP1P00817 287 aaKnown RBP2.8□□□□□ -1.96
LCB4YOR171C HEM2P05373 342 aa2.8□□□□□ -1.96
LCB4YOR171C RAD52P06778 471 aaKnown RBP2.8□□□□□ -1.96
LCB4YOR171C HEM15P16622 393 aa2.8□□□□□ -1.96
LCB4YOR171C YKL075CP36083 450 aa2.8□□□□□ -1.96
LCB4YOR171C YHR127WP38833 243 aaKnown RBP2.8□□□□□ -1.96
LCB4YOR171C LYS1P38998 373 aaRIP-Chip data2.8□□□□□ -1.96not detected
LCB4YOR171C FAA2P39518 744 aa2.8□□□□□ -1.96
LCB4YOR171C YIL152WP40455 235 aa2.8□□□□□ -1.96
LCB4YOR171C YFL064CP43540 174 aa2.8□□□□□ -1.96
LCB4YOR171C MRM2P53123 320 aa2.8□□□□□ -1.96
LCB4YOR171C SCW4P53334 386 aaKnown RBP2.8□□□□□ -1.96
LCB4YOR171C HCH1P53834 153 aa2.8□□□□□ -1.96
LCB4YOR171C HSK3P69852 69 aa2.8□□□□□ -1.96
LCB4YOR171C RAV2Q03956 351 aa2.8□□□□□ -1.96
LCB4YOR171C TSA2Q04120 196 aa2.8□□□□□ -1.96
LCB4YOR171C YDR391CQ04170 232 aa2.8□□□□□ -1.96
LCB4YOR171C SFH1Q06168 426 aa2.8□□□□□ -1.96
LCB4YOR171C SUE1Q06524 206 aa2.8□□□□□ -1.96
LCB4YOR171C YLR030WQ07967 263 aa2.8□□□□□ -1.96
LCB4YOR171C YPR202WQ08993 238 aa2.8□□□□□ -1.96
LCB4YOR171C YDL009CQ12210 107 aa2.8□□□□□ -1.96
LCB4YOR171C YLR126CQ12288 251 aa2.8□□□□□ -1.96
LCB4YOR171C MEX67Q99257 599 aaKnown RBP2.8□□□□□ -1.96
LCB4YOR171C IGO2Q9P305 131 aa2.8□□□□□ -1.96
LCB4YOR171C BI3Q9ZZW7 517 aa2.8□□□□□ -1.96
LCB4YOR171C SAL1D6W196 494 aa2.79□□□□□ -1.96
LCB4YOR171C MRS1P07266 363 aa2.79□□□□□ -1.96
LCB4YOR171C YGL041W-AP0C5N3 154 aa2.79□□□□□ -1.96
LCB4YOR171C TFS1P14306 219 aa2.79□□□□□ -1.96
LCB4YOR171C ERD2P18414 219 aa2.79□□□□□ -1.96
LCB4YOR171C TYR1P20049 452 aa2.79□□□□□ -1.96
LCB4YOR171C RPS2P25443 254 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C SFK1P35735 353 aa2.79□□□□□ -1.96
LCB4YOR171C CBP4P37267 147 aa2.79□□□□□ -1.96
LCB4YOR171C ECM14P38836 430 aa2.79□□□□□ -1.96
LCB4YOR171C LSM4P40070 187 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C SER2P42941 309 aa2.79□□□□□ -1.96
LCB4YOR171C YAE1P47118 141 aaPredicted RBP2.79□□□□□ -1.96
LCB4YOR171C SOL1P50278 321 aa2.79□□□□□ -1.96
LCB4YOR171C SYF2P53277 215 aaPredicted RBP2.79□□□□□ -1.96
LCB4YOR171C GPI15P53961 229 aa2.79□□□□□ -1.96
LCB4YOR171C NUP100Q02629 959 aa2.79□□□□□ -1.96
LCB4YOR171C YPL113CQ02961 396 aa2.79□□□□□ -1.96
LCB4YOR171C CTL1Q03220 320 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C FMN1Q03778 218 aa2.79□□□□□ -1.96
LCB4YOR171C GPI17Q04080 534 aa2.79□□□□□ -1.96
LCB4YOR171C YMR320WQ04897 101 aa2.79□□□□□ -1.96
LCB4YOR171C NKP2Q06162 153 aa2.79□□□□□ -1.96
LCB4YOR171C TRM10Q12400 293 aa2.79□□□□□ -1.96
LCB4YOR171C YFL068WP0CX99 160 aa2.79□□□□□ -1.96
LCB4YOR171C YLL066W-AP0CY00 160 aa2.79□□□□□ -1.96
LCB4YOR171C YLL067W-AP0CY01 160 aa2.79□□□□□ -1.96
LCB4YOR171C OAC1P32332 324 aa2.79□□□□□ -1.96
LCB4YOR171C FRE2P36033 711 aa2.79□□□□□ -1.96
LCB4YOR171C MRPL3P36516 390 aa2.79□□□□□ -1.96
LCB4YOR171C COS8P38723 381 aa2.79□□□□□ -1.96
LCB4YOR171C NDT80P38830 627 aa2.79□□□□□ -1.96
LCB4YOR171C YIA6P40556 373 aa2.79□□□□□ -1.96
LCB4YOR171C EGT2P42835 1041 aa2.79□□□□□ -1.96
LCB4YOR171C MOB2P43563 287 aa2.79□□□□□ -1.96
LCB4YOR171C AIM23P47015 356 aa2.79□□□□□ -1.96
LCB4YOR171C YJR015WP47090 510 aa2.79□□□□□ -1.96
LCB4YOR171C LSM8P47093 109 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C CPR7P47103 393 aa2.79□□□□□ -1.96
LCB4YOR171C YNL040WP53960 456 aaPredicted RBP2.79□□□□□ -1.96
LCB4YOR171C YVH1Q02256 364 aaKnown RBP2.79□□□□□ -1.96
LCB4YOR171C TRM12Q04235 462 aa2.79□□□□□ -1.96
LCB4YOR171C YMR027WQ04371 470 aa2.79□□□□□ -1.96
LCB4YOR171C YPR098CQ06089 161 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms