RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C PRX1P34227 261 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C POP8P38208 133 aa2.43□□□□□ -2.02
SUB1YMR039C YBR096WP38256 230 aa2.43□□□□□ -2.02
SUB1YMR039C GOS1P38736 223 aa2.43□□□□□ -2.02
SUB1YMR039C EDC2P40023 145 aaPredicted RBP2.43□□□□□ -2.02
SUB1YMR039C AVT6P40074 448 aa2.43□□□□□ -2.02
SUB1YMR039C YIL012WP40551 113 aa2.43□□□□□ -2.02
SUB1YMR039C MRS2Q01926 470 aa2.43□□□□□ -2.02
SUB1YMR039C CTF19Q02732 369 aa2.43□□□□□ -2.02
SUB1YMR039C YMR114CQ04471 368 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C CDC123Q05791 360 aa2.43□□□□□ -2.02
SUB1YMR039C ABP140Q08641 628 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C YRA1Q12159 226 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C DFM1Q12743 341 aaKnown RBP2.43□□□□□ -2.02
SUB1YMR039C MATALPHA2P0CY08 210 aa2.42□□□□□ -2.02
SUB1YMR039C HMLALPHA2P0CY09 210 aa2.42□□□□□ -2.02
SUB1YMR039C KSS1P14681 368 aa2.42□□□□□ -2.02
SUB1YMR039C PHO80P20052 293 aa2.42□□□□□ -2.02
SUB1YMR039C CDC10P25342 322 aaKnown RBP2.42□□□□□ -2.02
SUB1YMR039C EHD3P28817 500 aa2.42□□□□□ -2.02
SUB1YMR039C IDH1P28834 360 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SUB1YMR039C ERG2P32352 222 aa2.42□□□□□ -2.02
SUB1YMR039C NTF2P33331 125 aaKnown RBP2.42□□□□□ -2.02
SUB1YMR039C DRE2P36152 348 aa2.42□□□□□ -2.02
SUB1YMR039C ECM4P36156 370 aa2.42□□□□□ -2.02
SUB1YMR039C PHO89P38361 574 aa2.42□□□□□ -2.02
SUB1YMR039C YHR127WP38833 243 aaKnown RBP2.42□□□□□ -2.02
SUB1YMR039C ASP1P38986 381 aaPredicted RBP2.42□□□□□ -2.02
SUB1YMR039C YHB1P39676 399 aaKnown RBP2.42□□□□□ -2.02
SUB1YMR039C MCM22P47167 239 aa2.42□□□□□ -2.02
SUB1YMR039C MGA1P53050 456 aa2.42□□□□□ -2.02
SUB1YMR039C YGL118CP53132 145 aa2.42□□□□□ -2.02
SUB1YMR039C GET1P53192 235 aa2.42□□□□□ -2.02
SUB1YMR039C FMP41P53889 259 aaKnown RBP2.42□□□□□ -2.02
SUB1YMR039C AAH1P53909 347 aa2.42□□□□□ -2.02
SUB1YMR039C SEI1Q06058 285 aa2.42□□□□□ -2.02
SUB1YMR039C JLP1Q12358 412 aa2.42□□□□□ -2.02
SUB1YMR039C YAL063C-AQ3E791 96 aa2.42□□□□□ -2.02
SUB1YMR039C HTB1P02293 131 aaKnown RBP2.41□□□□□ -2.02
SUB1YMR039C HTB2P02294 131 aa2.41□□□□□ -2.02
SUB1YMR039C RPL28P02406 149 aaKnown RBP2.41□□□□□ -2.02
SUB1YMR039C YCR025CP25352 136 aa2.41□□□□□ -2.02
SUB1YMR039C ZRT3P34240 503 aa2.41□□□□□ -2.02
SUB1YMR039C TAF14P35189 244 aa2.41□□□□□ -2.02
SUB1YMR039C KDX1P36005 433 aa2.41□□□□□ -2.02
SUB1YMR039C MRPL39P36533 70 aa2.41□□□□□ -2.02
SUB1YMR039C HMT1P38074 348 aa2.41□□□□□ -2.02
SUB1YMR039C YHL049CP38722 271 aa2.41□□□□□ -2.02
SUB1YMR039C YHL044WP38727 235 aa2.41□□□□□ -2.02
SUB1YMR039C MRH4P53166 561 aa2.41□□□□□ -2.02
SUB1YMR039C EFM5P53200 248 aaKnown RBP2.41□□□□□ -2.02
SUB1YMR039C YMR244WQ04018 355 aa2.41□□□□□ -2.02
SUB1YMR039C YDR124WQ04608 324 aa2.41□□□□□ -2.02
SUB1YMR039C HEM25Q07534 307 aa2.41□□□□□ -2.02
SUB1YMR039C HRT1Q08273 121 aa2.41□□□□□ -2.02
SUB1YMR039C SYC1Q08553 188 aaPredicted RBP2.41□□□□□ -2.02
SUB1YMR039C YLR126CQ12288 251 aa2.41□□□□□ -2.02
SUB1YMR039C SNA3P14359 133 aa2.4□□□□□ -2.03
SUB1YMR039C CBF1P17106 351 aa2.4□□□□□ -2.03
SUB1YMR039C COX10P21592 462 aa2.4□□□□□ -2.03
SUB1YMR039C ACP1P32463 125 aa2.4□□□□□ -2.03
SUB1YMR039C IKI1P38874 309 aa2.4□□□□□ -2.03
SUB1YMR039C EGD2P38879 174 aaKnown RBP2.4□□□□□ -2.03
SUB1YMR039C YMR144WP40214 342 aaKnown RBP2.4□□□□□ -2.03
SUB1YMR039C SNZ3P43545 298 aa2.4□□□□□ -2.03
SUB1YMR039C ADO1P47143 340 aaKnown RBP2.4□□□□□ -2.03
SUB1YMR039C SNZ2P53824 298 aa2.4□□□□□ -2.03
SUB1YMR039C SWT21P53873 357 aaPredicted RBP2.4□□□□□ -2.03
SUB1YMR039C FYV6P53913 173 aa2.4□□□□□ -2.03
SUB1YMR039C ACT1P60010 375 aaKnown RBP2.4□□□□□ -2.03
SUB1YMR039C GOT1Q03554 138 aa2.4□□□□□ -2.03
SUB1YMR039C ARR2Q06597 130 aa2.4□□□□□ -2.03
SUB1YMR039C YDL211CQ12121 372 aa2.4□□□□□ -2.03
SUB1YMR039C YDR157WA0A023PZE8 133 aa2.39□□□□□ -2.03
SUB1YMR039C APA2P22108 325 aa2.39□□□□□ -2.03
SUB1YMR039C ATP7P30902 174 aa2.39□□□□□ -2.03
SUB1YMR039C BDH1P39714 382 aa2.39□□□□□ -2.03
SUB1YMR039C YIL059CP40520 121 aa2.39□□□□□ -2.03
SUB1YMR039C YIL001WP40560 513 aa2.39□□□□□ -2.03
SUB1YMR039C RPE1P46969 238 aa2.39□□□□□ -2.03
SUB1YMR039C YJL144WP47009 104 aa2.39□□□□□ -2.03
SUB1YMR039C IRC18P47056 224 aa2.39□□□□□ -2.03
SUB1YMR039C YJR149WP47177 404 aa2.39□□□□□ -2.03
SUB1YMR039C NUP57P48837 541 aa2.39□□□□□ -2.03
SUB1YMR039C TRM9P49957 279 aa2.39□□□□□ -2.03
SUB1YMR039C UFD1P53044 361 aa2.39□□□□□ -2.03
SUB1YMR039C BRR6P53062 197 aa2.39□□□□□ -2.03
SUB1YMR039C RTC4P53850 401 aa2.39□□□□□ -2.03
SUB1YMR039C YNL247WP53852 767 aaKnown RBP2.39□□□□□ -2.03
SUB1YMR039C NNT1Q05874 261 aa2.39□□□□□ -2.03
SUB1YMR039C ECM19Q06011 112 aa2.39□□□□□ -2.03
SUB1YMR039C TPO4Q12256 659 aa2.39□□□□□ -2.03
SUB1YMR039C YPR096CO13587 100 aa2.38□□□□□ -2.03
SUB1YMR039C COS2P0CX12 379 aa2.38□□□□□ -2.03
SUB1YMR039C COS3P0CX13 379 aa2.38□□□□□ -2.03
SUB1YMR039C RFA3P26755 122 aaKnown RBP2.38□□□□□ -2.03
SUB1YMR039C ADE1P27616 306 aa2.38□□□□□ -2.03
SUB1YMR039C BMH1P29311 267 aaKnown RBP2.38□□□□□ -2.03
SUB1YMR039C CSG2P35206 410 aa2.38□□□□□ -2.03
SUB1YMR039C TRM5P38793 499 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 208.8 ms