RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W OSW1Q08692 278 aa2.11□□□□□ -2.07
SDC25YLL016W YPL150WQ12152 901 aa2.11□□□□□ -2.07
SDC25YLL016W RPS18AP0CX55 146 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W RPS18BP0CX56 146 aaPredicted RBP2.11□□□□□ -2.07
SDC25YLL016W CBS2P14905 389 aa2.11□□□□□ -2.07
SDC25YLL016W EHD3P28817 500 aa2.11□□□□□ -2.07
SDC25YLL016W YBP1P38315 674 aa2.11□□□□□ -2.07
SDC25YLL016W PET8P38921 284 aa2.11□□□□□ -2.07
SDC25YLL016W UBP5P39944 805 aa2.11□□□□□ -2.07
SDC25YLL016W GAB1P41733 394 aa2.11□□□□□ -2.07
SDC25YLL016W SNZ3P43545 298 aa2.11□□□□□ -2.07
SDC25YLL016W PRP24P49960 444 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W MMS2P53152 137 aa2.11□□□□□ -2.07
SDC25YLL016W SNZ2P53824 298 aa2.11□□□□□ -2.07
SDC25YLL016W SKI8Q02793 397 aaPredicted RBP2.11□□□□□ -2.07
SDC25YLL016W PEX12Q04370 399 aa2.11□□□□□ -2.07
SDC25YLL016W YMR114CQ04471 368 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W YET3Q07451 203 aa2.11□□□□□ -2.07
SDC25YLL016W THP3Q12049 470 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W PRM4Q12498 284 aa2.11□□□□□ -2.07
SDC25YLL016W IFM1P25038 676 aa2.11□□□□□ -2.07
SDC25YLL016W URA10P30402 227 aa2.11□□□□□ -2.07
SDC25YLL016W SPS18P32572 300 aa2.11□□□□□ -2.07
SDC25YLL016W MRP21P38175 177 aa2.11□□□□□ -2.07
SDC25YLL016W HEK2P38199 381 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SDC25YLL016W FIG1P38224 298 aa2.11□□□□□ -2.07
SDC25YLL016W YBR137WP38276 179 aa2.11□□□□□ -2.07
SDC25YLL016W YER186CP40101 306 aa2.11□□□□□ -2.07
SDC25YLL016W AIM23P47015 356 aa2.11□□□□□ -2.07
SDC25YLL016W YLR152CP54072 576 aa2.11□□□□□ -2.07
SDC25YLL016W CTF19Q02732 369 aa2.11□□□□□ -2.07
SDC25YLL016W RNY1Q02933 434 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W DIG1Q03063 452 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W FSH2Q05015 223 aa2.11□□□□□ -2.07
SDC25YLL016W TAF10Q12030 206 aa2.11□□□□□ -2.07
SDC25YLL016W WTM1Q12363 437 aaKnown RBP2.11□□□□□ -2.07
SDC25YLL016W YMR316C-AI2HB70 103 aa2.1□□□□□ -2.07
SDC25YLL016W COX5AP00424 153 aa2.1□□□□□ -2.07
SDC25YLL016W STE7P06784 515 aa2.1□□□□□ -2.07
SDC25YLL016W CDC13P32797 924 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W PEX2P32800 271 aa2.1□□□□□ -2.07
SDC25YLL016W PRX1P34227 261 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W SRX1P36077 127 aa2.1□□□□□ -2.07
SDC25YLL016W RFT1P38206 574 aaPredicted RBP2.1□□□□□ -2.07
SDC25YLL016W SHG1P38337 142 aa2.1□□□□□ -2.07
SDC25YLL016W GRE3P38715 327 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SDC25YLL016W YHR127WP38833 243 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W KRE29P40026 464 aa2.1□□□□□ -2.07
SDC25YLL016W YKE4P40544 346 aa2.1□□□□□ -2.07
SDC25YLL016W DIM1P41819 318 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W COG7P53195 279 aa2.1□□□□□ -2.07
SDC25YLL016W FYV6P53913 173 aa2.1□□□□□ -2.07
SDC25YLL016W RSM10Q03201 203 aa2.1□□□□□ -2.07
SDC25YLL016W YLR446WQ06204 433 aa2.1□□□□□ -2.07
SDC25YLL016W BI3Q9ZZW7 517 aa2.1□□□□□ -2.07
SDC25YLL016W HHF1P02309 103 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W MIR1P23641 311 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W YOX1P34161 385 aa2.1□□□□□ -2.07
SDC25YLL016W MIX23P38162 196 aa2.1□□□□□ -2.07
SDC25YLL016W YNL208WP40159 199 aaKnown RBP2.1□□□□□ -2.07
SDC25YLL016W MDV1P47025 714 aa2.1□□□□□ -2.07
SDC25YLL016W TMA22P47089 198 aaPredicted RBP2.1□□□□□ -2.07
SDC25YLL016W MIG2P53035 382 aa2.1□□□□□ -2.07
SDC25YLL016W BRR6P53062 197 aa2.1□□□□□ -2.07
SDC25YLL016W WSC2P53832 503 aa2.1□□□□□ -2.07
SDC25YLL016W YDL199CQ12407 687 aa2.1□□□□□ -2.07
SDC25YLL016W TRP1P00912 224 aa2.09□□□□□ -2.07
SDC25YLL016W PET494P07390 489 aaPredicted RBP2.09□□□□□ -2.07
SDC25YLL016W TRR1P29509 319 aaKnown RBP2.09□□□□□ -2.07
SDC25YLL016W PMT2P31382 759 aa2.09□□□□□ -2.07
SDC25YLL016W ALK2P32789 676 aaPredicted RBP2.09□□□□□ -2.07
SDC25YLL016W YER121WP40076 114 aa2.09□□□□□ -2.07
SDC25YLL016W YMR144WP40214 342 aaKnown RBP2.09□□□□□ -2.07
SDC25YLL016W YFR057WP43625 151 aa2.09□□□□□ -2.07
SDC25YLL016W SHY1P53266 389 aa2.09□□□□□ -2.07
SDC25YLL016W SUR7P54003 302 aa2.09□□□□□ -2.07
SDC25YLL016W SNO1Q03144 224 aa2.09□□□□□ -2.07
SDC25YLL016W GGA1Q06336 557 aa2.09□□□□□ -2.07
SDC25YLL016W YPR147CQ06522 304 aaKnown RBP2.09□□□□□ -2.07
SDC25YLL016W YDL114WQ07530 308 aa2.09□□□□□ -2.07
SDC25YLL016W UTP20P35194 2493 aaKnown RBP2.09□□□□□ -2.07
SDC25YLL016W YAL064W-BO13512 126 aa2.09□□□□□ -2.08
SDC25YLL016W RPL43AP0CX25 92 aaKnown RBP2.09□□□□□ -2.08
SDC25YLL016W RPL43BP0CX26 92 aa2.09□□□□□ -2.08
SDC25YLL016W NTF2P33331 125 aaKnown RBP2.09□□□□□ -2.08
SDC25YLL016W MRPL3P36516 390 aa2.09□□□□□ -2.08
SDC25YLL016W YGL235WP53071 178 aa2.09□□□□□ -2.08
SDC25YLL016W TPN1P53099 579 aa2.09□□□□□ -2.08
SDC25YLL016W RPL15BP54780 204 aaPredicted RBP2.09□□□□□ -2.08
SDC25YLL016W VPS60Q03390 229 aa2.09□□□□□ -2.08
SDC25YLL016W YML018CQ03730 393 aa2.09□□□□□ -2.08
SDC25YLL016W SPC2Q04969 178 aa2.09□□□□□ -2.08
SDC25YLL016W RSA1Q08932 381 aa2.09□□□□□ -2.08
SDC25YLL016W YGK3Q12222 375 aaPredicted RBP2.09□□□□□ -2.08
SDC25YLL016W AYT1Q12226 474 aa2.09□□□□□ -2.08
SDC25YLL016W MCT1Q12283 360 aa2.09□□□□□ -2.08
SDC25YLL016W YKR104WP0CE69 306 aa2.08□□□□□ -2.08
SDC25YLL016W ATR1P13090 542 aa2.08□□□□□ -2.08
SDC25YLL016W GCY1P14065 312 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
SDC25YLL016W MDM10P18409 493 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms