RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C TIP20P33891 701 aa4.4□□□□□ -1.71
CAF4YKR036C YKL069WP36088 180 aa4.4□□□□□ -1.71
CAF4YKR036C MRPL11P36521 249 aaPredicted RBP4.4□□□□□ -1.71
CAF4YKR036C RRN10P38204 145 aa4.4□□□□□ -1.71
CAF4YKR036C MGE1P38523 228 aa4.4□□□□□ -1.71
CAF4YKR036C VPS52P39904 641 aa4.4□□□□□ -1.71
CAF4YKR036C NNF1P47149 201 aa4.4□□□□□ -1.71
CAF4YKR036C YJR124CP47159 448 aa4.4□□□□□ -1.71
CAF4YKR036C COQ5P49017 307 aa4.4□□□□□ -1.71
CAF4YKR036C NUP42P49686 430 aaKnown RBP4.4□□□□□ -1.71
CAF4YKR036C VHT1P53241 593 aa4.4□□□□□ -1.71
CAF4YKR036C EFM6P53970 246 aa4.4□□□□□ -1.71
CAF4YKR036C ERP1Q05359 219 aaKnown RBP4.4□□□□□ -1.71
CAF4YKR036C YLR179CQ06252 201 aaKnown RBP4.4□□□□□ -1.71
CAF4YKR036C OPI10Q08202 246 aa4.4□□□□□ -1.71
CAF4YKR036C TGL5Q12043 749 aa4.4□□□□□ -1.71
CAF4YKR036C YPR015CQ12531 247 aa4.4□□□□□ -1.71
CAF4YKR036C DDI2P0CH63 225 aa4.39□□□□□ -1.71
CAF4YKR036C DDI3P0CH64 225 aa4.39□□□□□ -1.71
CAF4YKR036C SLM5P25345 492 aaKnown RBP4.39□□□□□ -1.71
CAF4YKR036C SUA7P29055 345 aaPredicted RBP4.39□□□□□ -1.71
CAF4YKR036C YHR177WP38867 453 aa4.39□□□□□ -1.71
CAF4YKR036C PUG1P40100 303 aa4.39□□□□□ -1.71
CAF4YKR036C TIF34P40217 347 aaKnown RBP4.39□□□□□ -1.71
CAF4YKR036C LRO1P40345 661 aa4.39□□□□□ -1.71
CAF4YKR036C GWT1P47026 490 aa4.39□□□□□ -1.71
CAF4YKR036C YJR120WP47157 116 aa4.39□□□□□ -1.71
CAF4YKR036C YGR149WP48236 432 aa4.39□□□□□ -1.71
CAF4YKR036C AMA1P50082 593 aa4.39□□□□□ -1.71
CAF4YKR036C MUP1P50276 574 aa4.39□□□□□ -1.71
CAF4YKR036C ACS2P52910 683 aaKnown RBP4.39□□□□□ -1.71
CAF4YKR036C YAP1802P53309 568 aa4.39□□□□□ -1.71
CAF4YKR036C SMM1P53720 384 aaKnown RBP4.39□□□□□ -1.71
CAF4YKR036C PGA1P53896 198 aa4.39□□□□□ -1.71
CAF4YKR036C AQR1P53943 586 aa4.39□□□□□ -1.71
CAF4YKR036C SAM50P53969 484 aa4.39□□□□□ -1.71
CAF4YKR036C TMA23Q03525 211 aa4.39□□□□□ -1.71
CAF4YKR036C YDR132CQ03900 495 aa4.39□□□□□ -1.71
CAF4YKR036C RTT103Q05543 409 aa4.39□□□□□ -1.71
CAF4YKR036C NMA1Q06178 401 aaKnown RBP4.39□□□□□ -1.71
CAF4YKR036C TDA6Q06466 467 aa4.39□□□□□ -1.71
CAF4YKR036C LDB18Q07887 179 aa4.39□□□□□ -1.71
CAF4YKR036C TEN1Q07921 160 aa4.39□□□□□ -1.71
CAF4YKR036C CSI2Q08054 341 aa4.39□□□□□ -1.71
CAF4YKR036C COQ10Q08058 207 aa4.39□□□□□ -1.71
CAF4YKR036C TFB5Q3E7C1 72 aaPredicted RBP4.39□□□□□ -1.71
CAF4YKR036C COX5BP00425 151 aa4.38□□□□□ -1.71
CAF4YKR036C ILV5P06168 395 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C GDH1P07262 454 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C CPR1P14832 162 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C BNA4P38169 460 aa4.38□□□□□ -1.71
CAF4YKR036C FUI1P38196 639 aa4.38□□□□□ -1.71
CAF4YKR036C LDB7P38210 180 aa4.38□□□□□ -1.71
CAF4YKR036C YHL041WP38730 149 aa4.38□□□□□ -1.71
CAF4YKR036C UBX6P47049 396 aa4.38□□□□□ -1.71
CAF4YKR036C YJR011CP47086 261 aaPredicted RBP4.38□□□□□ -1.71
CAF4YKR036C LYS5P50113 272 aa4.38□□□□□ -1.71
CAF4YKR036C YGR042WP53227 271 aa4.38□□□□□ -1.71
CAF4YKR036C YDR366CP87287 132 aa4.38□□□□□ -1.71
CAF4YKR036C ISR1Q06098 443 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C NUT2Q06213 157 aa4.38□□□□□ -1.71
CAF4YKR036C TDH2P00358 332 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C CDC21P06785 304 aa4.38□□□□□ -1.71
CAF4YKR036C COX9P07255 59 aa4.38□□□□□ -1.71
CAF4YKR036C YPR170W-BP0C5R9 85 aa4.38□□□□□ -1.71
CAF4YKR036C CNE1P27825 502 aa4.38□□□□□ -1.71
CAF4YKR036C ERG1P32476 496 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C YKL075CP36083 450 aa4.38□□□□□ -1.71
CAF4YKR036C MRPS9P38120 278 aa4.38□□□□□ -1.71
CAF4YKR036C RIB5P38145 238 aa4.38□□□□□ -1.71
CAF4YKR036C ZTA1P38230 334 aaKnown RBP4.38□□□□□ -1.71
CAF4YKR036C TRS20P38334 175 aa4.38□□□□□ -1.71
CAF4YKR036C TRR2P38816 342 aa4.38□□□□□ -1.71
CAF4YKR036C PFS1P38872 237 aa4.38□□□□□ -1.71
CAF4YKR036C YHR210CP38893 341 aa4.38□□□□□ -1.71
CAF4YKR036C MET30P39014 640 aa4.38□□□□□ -1.71
CAF4YKR036C IST3P40565 148 aaPredicted RBP4.38□□□□□ -1.71
CAF4YKR036C YPS6P40583 537 aa4.38□□□□□ -1.71
CAF4YKR036C GTS1P40956 396 aa4.38□□□□□ -1.71
CAF4YKR036C ZIM17P42844 174 aa4.38□□□□□ -1.71
CAF4YKR036C YGR015CP53208 328 aa4.38□□□□□ -1.71
CAF4YKR036C YGR066CP53242 292 aa4.38□□□□□ -1.71
CAF4YKR036C ADD37Q03233 198 aa4.38□□□□□ -1.71
CAF4YKR036C SPC19Q03954 165 aa4.38□□□□□ -1.71
CAF4YKR036C RRT7Q07829 113 aa4.38□□□□□ -1.71
CAF4YKR036C DCI1Q08558 271 aa4.38□□□□□ -1.71
CAF4YKR036C NAT5Q08689 176 aa4.38□□□□□ -1.71
CAF4YKR036C CSM4Q08955 156 aa4.38□□□□□ -1.71
CAF4YKR036C FCF2Q12035 217 aaPredicted RBP4.38□□□□□ -1.71
CAF4YKR036C YOR338WQ99326 363 aa4.38□□□□□ -1.71
CAF4YKR036C COX2P00410 251 aa4.37□□□□□ -1.71
CAF4YKR036C TPI1P00942 248 aaKnown RBP4.37□□□□□ -1.71
CAF4YKR036C SST2P11972 698 aaKnown RBP4.37□□□□□ -1.71
CAF4YKR036C LSB5P25369 354 aa4.37□□□□□ -1.71
CAF4YKR036C PUT3P25502 979 aaPredicted RBP4.37□□□□□ -1.71
CAF4YKR036C GEX1P25596 615 aa4.37□□□□□ -1.71
CAF4YKR036C MIG1P27705 504 aa4.37□□□□□ -1.71
CAF4YKR036C CTF13P35203 478 aa4.37□□□□□ -1.71
CAF4YKR036C GEX2P36173 615 aa4.37□□□□□ -1.71
CAF4YKR036C YBR071WP38243 211 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms