RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C TY1B-LR1Q12088 1755 aaKnown RBP1.56□□□□□ -2.16
VMR1YHL035C TY1B-NL1Q12112 1755 aa1.56□□□□□ -2.16
VMR1YHL035C TY1B-GR1Q12141 1755 aa1.56□□□□□ -2.16
VMR1YHL035C TY1B-BLQ12490 1755 aa1.56□□□□□ -2.16
VMR1YHL035C CSG2P35206 410 aa1.56□□□□□ -2.16
VMR1YHL035C POP8P38208 133 aa1.56□□□□□ -2.16
VMR1YHL035C SER33P40510 469 aa1.56□□□□□ -2.16
VMR1YHL035C MAL13P53338 473 aa1.56□□□□□ -2.16
VMR1YHL035C YPL113CQ02961 396 aa1.56□□□□□ -2.16
VMR1YHL035C YDL211CQ12121 372 aa1.56□□□□□ -2.16
VMR1YHL035C TDH2P00358 332 aaKnown RBP1.56□□□□□ -2.16
VMR1YHL035C RPS14AP06367 137 aaKnown RBP1.56□□□□□ -2.16
VMR1YHL035C POF1P25576 258 aa1.56□□□□□ -2.16
VMR1YHL035C IME2P32581 645 aa1.56□□□□□ -2.16
VMR1YHL035C CAB3P36076 571 aa1.56□□□□□ -2.16
VMR1YHL035C RPS14BP39516 138 aaKnown RBP1.56□□□□□ -2.16
VMR1YHL035C SYC1Q08553 188 aaPredicted RBP1.56□□□□□ -2.16
VMR1YHL035C NOT5Q12514 560 aaPredicted RBP1.56□□□□□ -2.16
VMR1YHL035C SPL2P38839 148 aa1.55□□□□□ -2.16
VMR1YHL035C HOC1P47124 396 aa1.55□□□□□ -2.16
VMR1YHL035C MRP1P10662 321 aaKnown RBP1.55□□□□□ -2.16
VMR1YHL035C SPS100P13130 326 aa1.55□□□□□ -2.16
VMR1YHL035C COT1P32798 439 aa1.55□□□□□ -2.16
VMR1YHL035C ECM13P38195 257 aa1.55□□□□□ -2.16
VMR1YHL035C YHL049CP38722 271 aa1.55□□□□□ -2.16
VMR1YHL035C FCF1Q05498 189 aaPredicted RBP1.55□□□□□ -2.16
VMR1YHL035C POM33Q12164 279 aa1.55□□□□□ -2.16
VMR1YHL035C YMR316C-AI2HB70 103 aa1.55□□□□□ -2.16
VMR1YHL035C CCA1P21269 546 aa1.55□□□□□ -2.16
VMR1YHL035C PRE7P23724 241 aaKnown RBP1.55□□□□□ -2.16
VMR1YHL035C YBR062CP38239 180 aa1.55□□□□□ -2.16
VMR1YHL035C YHB1P39676 399 aaKnown RBP1.55□□□□□ -2.16
VMR1YHL035C COG3P40094 801 aa1.55□□□□□ -2.16
VMR1YHL035C PRE6P40303 254 aaKnown RBP1.55□□□□□ -2.16
VMR1YHL035C HAM1P47119 197 aaKnown RBP1.55□□□□□ -2.16
VMR1YHL035C YMR166CQ03829 368 aa1.55□□□□□ -2.16
VMR1YHL035C CTS2Q06350 511 aa1.55□□□□□ -2.16
VMR1YHL035C PAM18Q07914 168 aa1.55□□□□□ -2.16
VMR1YHL035C NUP192P47054 1683 aa1.55□□□□□ -2.16
VMR1YHL035C AGA2P32781 87 aa1.55□□□□□ -2.16
VMR1YHL035C SEN34P39707 275 aa1.55□□□□□ -2.16
VMR1YHL035C OTU1P43558 301 aa1.55□□□□□ -2.16
VMR1YHL035C CAX4P53223 239 aa1.55□□□□□ -2.16
VMR1YHL035C YDR124WQ04608 324 aa1.55□□□□□ -2.16
VMR1YHL035C CTR3Q06686 241 aa1.55□□□□□ -2.16
VMR1YHL035C MSH5Q12175 901 aa1.55□□□□□ -2.16
VMR1YHL035C YCT1Q12235 531 aa1.55□□□□□ -2.16
VMR1YHL035C IES3Q12345 250 aa1.55□□□□□ -2.16
VMR1YHL035C BCK1Q01389 1478 aa1.54□□□□□ -2.16
VMR1YHL035C HIS3P06633 220 aa1.54□□□□□ -2.16
VMR1YHL035C BFR1P38934 470 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
VMR1YHL035C YDR222WQ04925 415 aa1.54□□□□□ -2.16
VMR1YHL035C SPO77Q06134 477 aa1.54□□□□□ -2.16
VMR1YHL035C IMP1P28627 190 aa1.54□□□□□ -2.16
VMR1YHL035C PHO89P38361 574 aa1.54□□□□□ -2.16
VMR1YHL035C YER085CP40058 173 aa1.54□□□□□ -2.16
VMR1YHL035C YJR012CP47087 207 aa1.54□□□□□ -2.16
VMR1YHL035C TIM11P81449 96 aaPredicted RBP1.54□□□□□ -2.16
VMR1YHL035C CDC14Q00684 551 aa1.54□□□□□ -2.16
VMR1YHL035C CTF19Q02732 369 aa1.54□□□□□ -2.16
VMR1YHL035C GLG2P47011 380 aa1.54□□□□□ -2.16
VMR1YHL035C MCM22P47167 239 aa1.54□□□□□ -2.16
VMR1YHL035C YJR141WP47172 347 aaPredicted RBP1.54□□□□□ -2.16
VMR1YHL035C COQ10Q08058 207 aa1.54□□□□□ -2.16
VMR1YHL035C RPL26AP05743 127 aaKnown RBP1.54□□□□□ -2.16
VMR1YHL035C POX1P13711 748 aa1.54□□□□□ -2.16
VMR1YHL035C ERD2P18414 219 aa1.54□□□□□ -2.16
VMR1YHL035C EHD3P28817 500 aa1.54□□□□□ -2.16
VMR1YHL035C YER189WP40104 122 aa1.54□□□□□ -2.16
VMR1YHL035C MIC26P50087 233 aa1.54□□□□□ -2.16
VMR1YHL035C RMR1P53060 241 aa1.54□□□□□ -2.16
VMR1YHL035C NIF3P53081 288 aa1.54□□□□□ -2.16
VMR1YHL035C RPL26BP53221 127 aaKnown RBP1.54□□□□□ -2.16
VMR1YHL035C RNH1Q04740 348 aa1.54□□□□□ -2.16
VMR1YHL035C RLP24Q07915 199 aaKnown RBP1.54□□□□□ -2.16
VMR1YHL035C TOM40P23644 387 aaKnown RBP1.53□□□□□ -2.16
VMR1YHL035C CWP1P28319 239 aa1.53□□□□□ -2.16
VMR1YHL035C FMT1P32785 401 aa1.53□□□□□ -2.16
VMR1YHL035C SFC1P33303 322 aa1.53□□□□□ -2.16
VMR1YHL035C YER184CP39961 794 aa1.53□□□□□ -2.16
VMR1YHL035C SMB1P40018 196 aaKnown RBP1.53□□□□□ -2.16
VMR1YHL035C AVT7P40501 490 aa1.53□□□□□ -2.16
VMR1YHL035C CWC21Q03375 135 aaKnown RBP1.53□□□□□ -2.16
VMR1YHL035C GTO3Q04806 366 aa1.53□□□□□ -2.16
VMR1YHL035C FAR8Q05040 523 aa1.53□□□□□ -2.16
VMR1YHL035C SNU23Q12368 194 aaPredicted RBP1.53□□□□□ -2.16
VMR1YHL035C MRX4Q12467 430 aa1.53□□□□□ -2.16
VMR1YHL035C SGA1P08019 549 aa1.53□□□□□ -2.16
VMR1YHL035C PFS2P42841 465 aaKnown RBP1.53□□□□□ -2.16
VMR1YHL035C RPE1P46969 238 aa1.53□□□□□ -2.16
VMR1YHL035C USE1P53146 245 aa1.53□□□□□ -2.16
VMR1YHL035C BTS1Q12051 335 aa1.53□□□□□ -2.16
VMR1YHL035C TIM22Q12328 207 aa1.53□□□□□ -2.16
VMR1YHL035C MRPL25P23369 157 aa1.53□□□□□ -2.16
VMR1YHL035C YJL144WP47009 104 aa1.53□□□□□ -2.16
VMR1YHL035C PEX31P53203 462 aa1.53□□□□□ -2.16
VMR1YHL035C PET117Q02771 107 aa1.53□□□□□ -2.16
VMR1YHL035C YMR244WQ04018 355 aa1.53□□□□□ -2.16
VMR1YHL035C YPL247CQ12523 523 aa1.53□□□□□ -2.16
VMR1YHL035C LYS2P07702 1392 aa1.53□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms