RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W STE3P06783 470 aa1.19□□□□□ -2.22
RTT102YGR275W GAL7P08431 366 aa1.19□□□□□ -2.22
RTT102YGR275W ERD1P16151 362 aa1.19□□□□□ -2.22
RTT102YGR275W YSR3P23501 404 aa1.19□□□□□ -2.22
RTT102YGR275W VMA5P31412 392 aaKnown RBP1.19□□□□□ -2.22
RTT102YGR275W YKL102CP34249 101 aa1.19□□□□□ -2.22
RTT102YGR275W CSG2P35206 410 aa1.19□□□□□ -2.22
RTT102YGR275W APE4P38821 490 aa1.19□□□□□ -2.22
RTT102YGR275W PET8P38921 284 aa1.19□□□□□ -2.22
RTT102YGR275W ALP1P38971 573 aa1.19□□□□□ -2.22
RTT102YGR275W PRP39P39682 629 aaKnown RBP1.19□□□□□ -2.22
RTT102YGR275W YEL075CP39972 122 aa1.19□□□□□ -2.22
RTT102YGR275W YEL073CP39974 107 aa1.19□□□□□ -2.22
RTT102YGR275W TAF6P53040 516 aa1.19□□□□□ -2.22
RTT102YGR275W UFD1P53044 361 aa1.19□□□□□ -2.22
RTT102YGR275W YGR016WP53209 190 aa1.19□□□□□ -2.22
RTT102YGR275W PXR1P53335 271 aaPredicted RBP1.19□□□□□ -2.22
RTT102YGR275W GRX8Q05926 109 aa1.19□□□□□ -2.22
RTT102YGR275W MSA1Q08471 629 aa1.19□□□□□ -2.22
RTT102YGR275W YOR292CQ08743 309 aa1.19□□□□□ -2.22
RTT102YGR275W PGC1Q08959 321 aa1.19□□□□□ -2.22
RTT102YGR275W GEP5Q12393 293 aa1.19□□□□□ -2.22
RTT102YGR275W DBF2P22204 572 aa1.18□□□□□ -2.22
RTT102YGR275W ACB1P31787 87 aa1.18□□□□□ -2.22
RTT102YGR275W MRPL6P32904 214 aa1.18□□□□□ -2.22
RTT102YGR275W SFC1P33303 322 aa1.18□□□□□ -2.22
RTT102YGR275W GIM4P40005 111 aaKnown RBP1.18□□□□□ -2.22
RTT102YGR275W YER189WP40104 122 aa1.18□□□□□ -2.22
RTT102YGR275W YMR144WP40214 342 aaKnown RBP1.18□□□□□ -2.22
RTT102YGR275W HOP2P53187 214 aa1.18□□□□□ -2.22
RTT102YGR275W ADH6Q04894 360 aaKnown RBP1.18□□□□□ -2.22
RTT102YGR275W YLR297WQ05899 129 aa1.18□□□□□ -2.22
RTT102YGR275W SWC7Q06707 132 aa1.18□□□□□ -2.22
RTT102YGR275W ERP4Q12450 207 aa1.18□□□□□ -2.22
RTT102YGR275W PFK27Q12471 397 aaPredicted RBP1.18□□□□□ -2.22
RTT102YGR275W FRE6Q12473 712 aa1.18□□□□□ -2.22
RTT102YGR275W SPO24Q3E752 67 aa1.18□□□□□ -2.22
RTT102YGR275W SLH1P53327 1967 aaKnown RBP1.17□□□□□ -2.22
RTT102YGR275W VPH2P32341 215 aa1.17□□□□□ -2.22
RTT102YGR275W AEP1P32493 518 aa1.17□□□□□ -2.22
RTT102YGR275W RPS27AP35997 82 aaKnown RBP1.17□□□□□ -2.22
RTT102YGR275W RPS27BP38711 82 aa1.17□□□□□ -2.22
RTT102YGR275W YEL028WP39989 153 aa1.17□□□□□ -2.22
RTT102YGR275W HOC1P47124 396 aa1.17□□□□□ -2.22
RTT102YGR275W RAD17P48581 401 aa1.17□□□□□ -2.22
RTT102YGR275W MIG2P53035 382 aa1.17□□□□□ -2.22
RTT102YGR275W TIM13P53299 105 aa1.17□□□□□ -2.22
RTT102YGR275W RSM27P53305 110 aa1.17□□□□□ -2.22
RTT102YGR275W PDR16P53860 351 aaKnown RBP1.17□□□□□ -2.22
RTT102YGR275W TRM12Q04235 462 aa1.17□□□□□ -2.22
RTT102YGR275W LDB18Q07887 179 aa1.17□□□□□ -2.22
RTT102YGR275W OCA6Q12454 224 aa1.17□□□□□ -2.22
RTT102YGR275W YOR032W-AQ8TGS1 66 aa1.17□□□□□ -2.22
RTT102YGR275W FLO9P39712 1322 aa1.16□□□□□ -2.22
RTT102YGR275W RPS3P05750 240 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W CDC36P06100 191 aaPredicted RBP1.16□□□□□ -2.22
RTT102YGR275W PRP18P33411 251 aaPredicted RBP1.16□□□□□ -2.22
RTT102YGR275W ADH5P38113 351 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W YBR062CP38239 180 aa1.16□□□□□ -2.22
RTT102YGR275W PRS3P38689 320 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W YHL044WP38727 235 aa1.16□□□□□ -2.22
RTT102YGR275W PRE6P40303 254 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W YIL012WP40551 113 aa1.16□□□□□ -2.22
RTT102YGR275W GDS1P41913 522 aa1.16□□□□□ -2.22
RTT102YGR275W SNZ3P43545 298 aa1.16□□□□□ -2.22
RTT102YGR275W YGL114WP53134 725 aa1.16□□□□□ -2.22
RTT102YGR275W SNZ2P53824 298 aa1.16□□□□□ -2.22
RTT102YGR275W CDC14Q00684 551 aa1.16□□□□□ -2.22
RTT102YGR275W RVB1Q03940 463 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W SEC13Q04491 297 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W YOR283WQ12040 230 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W YOR114WQ12219 294 aa1.16□□□□□ -2.22
RTT102YGR275W EFG1Q3E705 233 aaKnown RBP1.16□□□□□ -2.22
RTT102YGR275W SEY1Q99287 776 aa1.16□□□□□ -2.22
RTT102YGR275W CDC33P07260 213 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W MSS116P15424 664 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W BMH1P29311 267 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W MGM101P32787 269 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W CLB6P32943 380 aa1.15□□□□□ -2.23
RTT102YGR275W YHR045WP38775 560 aa1.15□□□□□ -2.23
RTT102YGR275W SOP4P39543 234 aaPredicted RBP1.15□□□□□ -2.23
RTT102YGR275W SYS1P41544 203 aa1.15□□□□□ -2.23
RTT102YGR275W YFL064CP43540 174 aa1.15□□□□□ -2.23
RTT102YGR275W BAT2P47176 376 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W DSK2P48510 373 aa1.15□□□□□ -2.23
RTT102YGR275W ALG9P53868 555 aaKnown RBP1.15□□□□□ -2.23
RTT102YGR275W OSH6Q02201 448 aa1.15□□□□□ -2.23
RTT102YGR275W GAS3Q03655 524 aa1.15□□□□□ -2.23
RTT102YGR275W BUR2Q05949 395 aa1.15□□□□□ -2.23
RTT102YGR275W RDS3Q06835 107 aaPredicted RBP1.15□□□□□ -2.23
RTT102YGR275W PML1Q07930 204 aaPredicted RBP1.15□□□□□ -2.23
RTT102YGR275W PRR2Q12310 699 aa1.15□□□□□ -2.23
RTT102YGR275W GTT2Q12390 233 aa1.15□□□□□ -2.23
RTT102YGR275W Q0144Q9ZZW2 109 aa1.15□□□□□ -2.23
RTT102YGR275W YFR010W-AP0C5N0 62 aa1.14□□□□□ -2.23
RTT102YGR275W IMP3P32899 183 aaPredicted RBP1.14□□□□□ -2.23
RTT102YGR275W LAS1P36146 502 aaPredicted RBP1.14□□□□□ -2.23
RTT102YGR275W LDB7P38210 180 aa1.14□□□□□ -2.23
RTT102YGR275W GRE3P38715 327 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
RTT102YGR275W ARN2P38724 620 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms