RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C SAL1D6W196 494 aa3.18□□□□□ -1.9
SPT4YGR063C TDH2P00358 332 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C TDH3P00359 332 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SPT4YGR063C MES1P00958 751 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C CDC9P04819 755 aa3.18□□□□□ -1.9
SPT4YGR063C CDC36P06100 191 aaPredicted RBP3.18□□□□□ -1.9
SPT4YGR063C QCR2P07257 368 aa3.18□□□□□ -1.9
SPT4YGR063C PHO2P07269 559 aa3.18□□□□□ -1.9
SPT4YGR063C MSF1P08425 469 aa3.18□□□□□ -1.9
SPT4YGR063C YCR007CP25354 239 aa3.18□□□□□ -1.9
SPT4YGR063C ATS1P31386 333 aa3.18□□□□□ -1.9
SPT4YGR063C COT1P32798 439 aa3.18□□□□□ -1.9
SPT4YGR063C MNS1P32906 549 aa3.18□□□□□ -1.9
SPT4YGR063C YKL187CP34231 750 aa3.18□□□□□ -1.9
SPT4YGR063C MTH1P35198 433 aa3.18□□□□□ -1.9
SPT4YGR063C MRP21P38175 177 aa3.18□□□□□ -1.9
SPT4YGR063C SHE1P38200 338 aa3.18□□□□□ -1.9
SPT4YGR063C WSS1P38838 269 aa3.18□□□□□ -1.9
SPT4YGR063C CTF8P38877 133 aa3.18□□□□□ -1.9
SPT4YGR063C FAA3P39002 694 aa3.18□□□□□ -1.9
SPT4YGR063C HMF1P40037 129 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C NSA2P40078 261 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C YER158CP40095 573 aa3.18□□□□□ -1.9
SPT4YGR063C YIR007WP40566 764 aa3.18□□□□□ -1.9
SPT4YGR063C POP1P41812 875 aa3.18□□□□□ -1.9
SPT4YGR063C PAU5P43575 122 aa3.18□□□□□ -1.9
SPT4YGR063C RRT5P43607 289 aa3.18□□□□□ -1.9
SPT4YGR063C BNS1P50084 137 aa3.18□□□□□ -1.9
SPT4YGR063C MIC26P50087 233 aa3.18□□□□□ -1.9
SPT4YGR063C VPS73P53142 486 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C THG1P53215 237 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C PAU12P53343 120 aa3.18□□□□□ -1.9
SPT4YGR063C RNH201P53942 307 aa3.18□□□□□ -1.9
SPT4YGR063C YNL018CP53976 612 aa3.18□□□□□ -1.9
SPT4YGR063C DYN2Q02647 92 aa3.18□□□□□ -1.9
SPT4YGR063C MSC2Q03455 724 aa3.18□□□□□ -1.9
SPT4YGR063C TMA23Q03525 211 aa3.18□□□□□ -1.9
SPT4YGR063C GMC1Q04399 608 aa3.18□□□□□ -1.9
SPT4YGR063C ASM4Q05166 528 aa3.18□□□□□ -1.9
SPT4YGR063C LOA1Q06508 300 aa3.18□□□□□ -1.9
SPT4YGR063C MCH1Q07376 486 aa3.18□□□□□ -1.9
SPT4YGR063C GUD1Q07729 489 aa3.18□□□□□ -1.9
SPT4YGR063C YLR030WQ07967 263 aa3.18□□□□□ -1.9
SPT4YGR063C YLR036CQ07986 203 aa3.18□□□□□ -1.9
SPT4YGR063C BSC6Q08280 497 aa3.18□□□□□ -1.9
SPT4YGR063C THI72Q08579 599 aa3.18□□□□□ -1.9
SPT4YGR063C NAT5Q08689 176 aa3.18□□□□□ -1.9
SPT4YGR063C VTS1Q08831 523 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SPT4YGR063C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SPT4YGR063C YDR056CQ12025 205 aa3.18□□□□□ -1.9
SPT4YGR063C FSF1Q12029 327 aaKnown RBP3.18□□□□□ -1.9
SPT4YGR063C FCF2Q12035 217 aaPredicted RBP3.18□□□□□ -1.9
SPT4YGR063C TGL5Q12043 749 aa3.18□□□□□ -1.9
SPT4YGR063C TIR4Q12218 487 aaPredicted RBP3.18□□□□□ -1.9
SPT4YGR063C UBX3Q12229 455 aa3.18□□□□□ -1.9
SPT4YGR063C PRR2Q12310 699 aa3.18□□□□□ -1.9
SPT4YGR063C ERP3Q12403 225 aa3.18□□□□□ -1.9
SPT4YGR063C Q0010Q9ZZX9 128 aa3.18□□□□□ -1.9
SPT4YGR063C MBF1O14467 151 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C COX3P00420 269 aa3.17□□□□□ -1.9
SPT4YGR063C PAI3P01094 68 aa3.17□□□□□ -1.9
SPT4YGR063C RIP1P08067 215 aa3.17□□□□□ -1.9
SPT4YGR063C HVG1P0CE11 249 aa3.17□□□□□ -1.9
SPT4YGR063C ERS1P17261 260 aa3.17□□□□□ -1.9
SPT4YGR063C YIH1P25637 258 aa3.17□□□□□ -1.9
SPT4YGR063C OCH1P31755 480 aa3.17□□□□□ -1.9
SPT4YGR063C ERG3P32353 365 aa3.17□□□□□ -1.9
SPT4YGR063C MRP49P32388 137 aa3.17□□□□□ -1.9
SPT4YGR063C FMT1P32785 401 aa3.17□□□□□ -1.9
SPT4YGR063C PAU24P38155 120 aa3.17□□□□□ -1.9
SPT4YGR063C MIX23P38162 196 aa3.17□□□□□ -1.9
SPT4YGR063C ZTA1P38230 334 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C TAE1P38340 232 aa3.17□□□□□ -1.9
SPT4YGR063C PTH1P38876 190 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C SEC72P39742 193 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C SNU13P39990 126 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C DLS1P40366 167 aa3.17□□□□□ -1.9
SPT4YGR063C SMK1P41808 388 aa3.17□□□□□ -1.9
SPT4YGR063C PET130P47065 347 aa3.17□□□□□ -1.9
SPT4YGR063C YGR149WP48236 432 aa3.17□□□□□ -1.9
SPT4YGR063C YGL262WP53054 175 aa3.17□□□□□ -1.9
SPT4YGR063C VHT1P53241 593 aa3.17□□□□□ -1.9
SPT4YGR063C RTT102P53330 157 aa3.17□□□□□ -1.9
SPT4YGR063C YGR283CP53336 341 aaPredicted RBP3.17□□□□□ -1.9
SPT4YGR063C BOR1P53838 576 aa3.17□□□□□ -1.9
SPT4YGR063C NSG2P53898 299 aa3.17□□□□□ -1.9
SPT4YGR063C DIA1P54005 336 aa3.17□□□□□ -1.9
SPT4YGR063C YDR444WQ04093 687 aa3.17□□□□□ -1.9
SPT4YGR063C GTO3Q04806 366 aa3.17□□□□□ -1.9
SPT4YGR063C ROY1Q04847 553 aa3.17□□□□□ -1.9
SPT4YGR063C ELP6Q04868 273 aa3.17□□□□□ -1.9
SPT4YGR063C DAL4Q04895 635 aa3.17□□□□□ -1.9
SPT4YGR063C SCW10Q04951 389 aa3.17□□□□□ -1.9
SPT4YGR063C MRX8Q05473 314 aa3.17□□□□□ -1.9
SPT4YGR063C SHS1Q07657 551 aa3.17□□□□□ -1.9
SPT4YGR063C YCT1Q12235 531 aa3.17□□□□□ -1.9
SPT4YGR063C RDL1Q12305 139 aaKnown RBP3.17□□□□□ -1.9
SPT4YGR063C PCL9Q12477 304 aa3.17□□□□□ -1.9
SPT4YGR063C SRF1Q12516 437 aa3.17□□□□□ -1.9
SPT4YGR063C YJR112W-AQ3E743 109 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms