RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W SEC59P20048 519 aa6.32□□□□□ -1.4
SNF4YGL115W ERG4P25340 473 aa6.32□□□□□ -1.4
SNF4YGL115W NFS1P25374 497 aa6.32□□□□□ -1.4
SNF4YGL115W AGP1P25376 633 aa6.32□□□□□ -1.4
SNF4YGL115W MDH3P32419 343 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SNF4YGL115W SRB5P32585 307 aa6.32□□□□□ -1.4
SNF4YGL115W TRS65P32893 560 aa6.32□□□□□ -1.4
SNF4YGL115W SNC2P33328 115 aa6.32□□□□□ -1.4
SNF4YGL115W MRPL4P36517 319 aa6.32□□□□□ -1.4
SNF4YGL115W TAE1P38340 232 aa6.32□□□□□ -1.4
SNF4YGL115W YPT31P38555 223 aaKnown RBP6.32□□□□□ -1.4
SNF4YGL115W PRS2P38620 318 aaKnown RBP6.32□□□□□ -1.4
SNF4YGL115W LSM4P40070 187 aaKnown RBP6.32□□□□□ -1.4
SNF4YGL115W DLS1P40366 167 aa6.32□□□□□ -1.4
SNF4YGL115W SLM1P40485 686 aa6.32□□□□□ -1.4
SNF4YGL115W YIL077CP40508 320 aa6.32□□□□□ -1.4
SNF4YGL115W PAU15P40585 124 aa6.32□□□□□ -1.4
SNF4YGL115W AIM24P47127 394 aa6.32□□□□□ -1.4
SNF4YGL115W BXI1P48558 297 aa6.32□□□□□ -1.4
SNF4YGL115W YLR152CP54072 576 aa6.32□□□□□ -1.4
SNF4YGL115W APM1Q00776 475 aaPredicted RBP6.32□□□□□ -1.4
SNF4YGL115W LEE1Q02799 301 aaKnown RBP6.32□□□□□ -1.4
SNF4YGL115W HNT1Q04344 158 aaKnown RBP6.32□□□□□ -1.4
SNF4YGL115W PML1Q07930 204 aaPredicted RBP6.32□□□□□ -1.4
SNF4YGL115W PFA4Q12006 378 aa6.32□□□□□ -1.4
SNF4YGL115W DCN1Q12395 269 aa6.32□□□□□ -1.4
SNF4YGL115W CPR5P35176 225 aa6.31□□□□□ -1.4
SNF4YGL115W SPT10P35208 640 aa6.31□□□□□ -1.4
SNF4YGL115W POP8P38208 133 aa6.31□□□□□ -1.4
SNF4YGL115W YJR056CP47115 236 aa6.31□□□□□ -1.4
SNF4YGL115W YIP4P53093 235 aa6.31□□□□□ -1.4
SNF4YGL115W NPY1P53164 384 aa6.31□□□□□ -1.4
SNF4YGL115W PKP2P53170 491 aa6.31□□□□□ -1.4
SNF4YGL115W MPP6P53725 186 aaPredicted RBP6.31□□□□□ -1.4
SNF4YGL115W BSC5P53755 489 aa6.31□□□□□ -1.4
SNF4YGL115W OCA2P53949 197 aa6.31□□□□□ -1.4
SNF4YGL115W RSM10Q03201 203 aa6.31□□□□□ -1.4
SNF4YGL115W MRPL1Q04599 285 aa6.31□□□□□ -1.4
SNF4YGL115W RRT7Q07829 113 aa6.31□□□□□ -1.4
SNF4YGL115W YLR146W-AQ2V2P1 62 aa6.31□□□□□ -1.4
SNF4YGL115W MEX67Q99257 599 aaKnown RBP6.31□□□□□ -1.4
SNF4YGL115W CCH1P50077 2039 aa6.31□□□□□ -1.4
SNF4YGL115W GAL7P08431 366 aa6.3□□□□□ -1.4
SNF4YGL115W NUP1P20676 1076 aa6.3□□□□□ -1.4
SNF4YGL115W ADH7P25377 361 aa6.3□□□□□ -1.4
SNF4YGL115W POF1P25576 258 aa6.3□□□□□ -1.4
SNF4YGL115W SSS1P35179 80 aa6.3□□□□□ -1.4
SNF4YGL115W BUD8P41698 603 aa6.3□□□□□ -1.4
SNF4YGL115W MNN10P50108 393 aaKnown RBP6.3□□□□□ -1.4
SNF4YGL115W UFD1P53044 361 aa6.3□□□□□ -1.4
SNF4YGL115W RHO3Q00245 231 aaKnown RBP6.3□□□□□ -1.4
SNF4YGL115W MRPS17Q03246 237 aaPredicted RBP6.3□□□□□ -1.4
SNF4YGL115W TMA23Q03525 211 aa6.3□□□□□ -1.4
SNF4YGL115W YML096WQ04489 525 aa6.3□□□□□ -1.4
SNF4YGL115W MRX8Q05473 314 aa6.3□□□□□ -1.4
SNF4YGL115W HEM25Q07534 307 aa6.3□□□□□ -1.4
SNF4YGL115W RAD28Q12021 506 aa6.3□□□□□ -1.4
SNF4YGL115W LEU9Q12166 604 aaKnown RBP6.3□□□□□ -1.4
SNF4YGL115W MCT1Q12283 360 aa6.3□□□□□ -1.4
SNF4YGL115W YLR118CQ12354 227 aa6.3□□□□□ -1.4
SNF4YGL115W PPH21P23594 369 aa6.29□□□□□ -1.4
SNF4YGL115W SCM4P32564 187 aa6.29□□□□□ -1.4
SNF4YGL115W NRP1P32770 719 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SNF4YGL115W PTR2P32901 601 aa6.29□□□□□ -1.4
SNF4YGL115W SLC1P33333 303 aa6.29□□□□□ -1.4
SNF4YGL115W PAD1P33751 242 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SNF4YGL115W AUR1P36107 401 aaPredicted RBP6.29□□□□□ -1.4
SNF4YGL115W YEA6P39953 335 aa6.29□□□□□ -1.4
SNF4YGL115W RFC2P40348 353 aa6.29□□□□□ -1.4
SNF4YGL115W NIT2P47016 307 aa6.29□□□□□ -1.4
SNF4YGL115W NIT3P49954 291 aa6.29□□□□□ -1.4
SNF4YGL115W UBP8P50102 471 aa6.29□□□□□ -1.4
SNF4YGL115W ELA1P53861 379 aaPredicted RBP6.29□□□□□ -1.4
SNF4YGL115W INP1Q03694 420 aa6.29□□□□□ -1.4
SNF4YGL115W YML018CQ03730 393 aa6.29□□□□□ -1.4
SNF4YGL115W HOF1Q05080 669 aa6.29□□□□□ -1.4
SNF4YGL115W ASM4Q05166 528 aa6.29□□□□□ -1.4
SNF4YGL115W ERP1Q05359 219 aaKnown RBP6.29□□□□□ -1.4
SNF4YGL115W COQ10Q08058 207 aa6.29□□□□□ -1.4
SNF4YGL115W VAM3Q12241 283 aa6.29□□□□□ -1.4
SNF4YGL115W QCR2P07257 368 aa6.28□□□□□ -1.4
SNF4YGL115W GAS1P22146 559 aaKnown RBP6.28□□□□□ -1.4
SNF4YGL115W YBR013CP38215 129 aa6.28□□□□□ -1.4
SNF4YGL115W FAT1P38225 669 aa6.28□□□□□ -1.4
SNF4YGL115W CHS7P38843 316 aa6.28□□□□□ -1.4
SNF4YGL115W SUR2P38992 349 aa6.28□□□□□ -1.4
SNF4YGL115W YEA4P40004 342 aa6.28□□□□□ -1.4
SNF4YGL115W SLZ1P40167 298 aa6.28□□□□□ -1.4
SNF4YGL115W YIL067CP40514 678 aa6.28□□□□□ -1.4
SNF4YGL115W MGA1P53050 456 aa6.28□□□□□ -1.4
SNF4YGL115W YGR045CP53229 120 aa6.28□□□□□ -1.4
SNF4YGL115W YGR066CP53242 292 aa6.28□□□□□ -1.4
SNF4YGL115W TPC1P53257 314 aa6.28□□□□□ -1.4
SNF4YGL115W YIF1P53845 314 aaKnown RBP6.28□□□□□ -1.4
SNF4YGL115W TDA7P53882 636 aaPredicted RBP6.28□□□□□ -1.4
SNF4YGL115W YDR248CQ03786 193 aa6.28□□□□□ -1.4
SNF4YGL115W CAB5Q03941 241 aa6.28□□□□□ -1.4
SNF4YGL115W RTT103Q05543 409 aa6.28□□□□□ -1.4
SNF4YGL115W CTR3Q06686 241 aa6.28□□□□□ -1.4
SNF4YGL115W AVO1Q08236 1176 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms