RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	PRP46	Q12417	451 aa	Predicted RBP	1.44	□□□□□ -2.18
DOT6	YER088C	APC2	Q12440	853 aa		1.44	□□□□□ -2.18
DOT6	YER088C	PFK27	Q12471	397 aa	Predicted RBP	1.44	□□□□□ -2.18
DOT6	YER088C	IZH4	Q99393	312 aa		1.44	□□□□□ -2.18
DOT6	YER088C	SLH1	P53327	1967 aa	Known RBP	1.43	□□□□□ -2.18
DOT6	YER088C	CDC37	P06101	506 aa	Known RBP	1.43	□□□□□ -2.18
DOT6	YER088C	RPS23A	P0CX29	145 aa	Known RBP	1.43	□□□□□ -2.18
DOT6	YER088C	RPS23B	P0CX30	145 aa		1.43	□□□□□ -2.18
DOT6	YER088C	GCD2	P12754	651 aa	Predicted RBP	1.43	□□□□□ -2.18
DOT6	YER088C	MEI5	P32489	222 aa		1.43	□□□□□ -2.18
DOT6	YER088C	AST1	P35183	429 aa		1.43	□□□□□ -2.18
DOT6	YER088C	GPX1	P36014	167 aa		1.43	□□□□□ -2.18
DOT6	YER088C	MCH2	P36032	473 aa		1.43	□□□□□ -2.18
DOT6	YER088C	TRM7	P38238	310 aa	Known RBP	1.43	□□□□□ -2.18
DOT6	YER088C	SLM1	P40485	686 aa		1.43	□□□□□ -2.18
DOT6	YER088C	YIR035C	P40579	254 aa		1.43	□□□□□ -2.18
DOT6	YER088C	PHB1	P40961	287 aa		1.43	□□□□□ -2.18
DOT6	YER088C	ABZ2	Q03266	374 aa		1.43	□□□□□ -2.18
DOT6	YER088C	CAB5	Q03941	241 aa		1.43	□□□□□ -2.18
DOT6	YER088C	EFG1	Q3E705	233 aa	Known RBP	1.43	□□□□□ -2.18
DOT6	YER088C	SEY1	Q99287	776 aa		1.43	□□□□□ -2.18
DOT6	YER088C	CBP2	P03874	630 aa	Predicted RBP	1.42	□□□□□ -2.18
DOT6	YER088C	ITR2	P30606	609 aa		1.42	□□□□□ -2.18
DOT6	YER088C	SSO2	P39926	295 aa		1.42	□□□□□ -2.18
DOT6	YER088C	GIM4	P40005	111 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	RTT105	P40063	208 aa		1.42	□□□□□ -2.18
DOT6	YER088C	UTP25	P40498	721 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	LOC1	P43586	204 aa	Predicted RBP	1.42	□□□□□ -2.18
DOT6	YER088C	RIB4	P50861	169 aa	Predicted RBP	1.42	□□□□□ -2.18
DOT6	YER088C	CDC14	Q00684	551 aa		1.42	□□□□□ -2.18
DOT6	YER088C	MRS2	Q01926	470 aa		1.42	□□□□□ -2.18
DOT6	YER088C	YPL080C	Q02826	108 aa		1.42	□□□□□ -2.18
DOT6	YER088C	TRM12	Q04235	462 aa		1.42	□□□□□ -2.18
DOT6	YER088C	DTD1	Q07648	150 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	YOR292C	Q08743	309 aa		1.42	□□□□□ -2.18
DOT6	YER088C	YPL245W	Q12179	454 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	DDP1	Q99321	188 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	MRPL20	P22354	195 aa	Predicted RBP	1.42	□□□□□ -2.18
DOT6	YER088C	PET18	P25362	215 aa		1.42	□□□□□ -2.18
DOT6	YER088C	VPH2	P32341	215 aa		1.42	□□□□□ -2.18
DOT6	YER088C	ARO4	P32449	370 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	SFC1	P33303	322 aa		1.42	□□□□□ -2.18
DOT6	YER088C	YPT52	P36018	234 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	CAB3	P36076	571 aa		1.42	□□□□□ -2.18
DOT6	YER088C	YHR035W	P38769	630 aa		1.42	□□□□□ -2.18
DOT6	YER088C	END3	P39013	349 aa		1.42	□□□□□ -2.18
DOT6	YER088C	CUP9	P41817	306 aa		1.42	□□□□□ -2.18
DOT6	YER088C	TRM9	P49957	279 aa		1.42	□□□□□ -2.18
DOT6	YER088C	DBP6	P53734	629 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	EBS1	Q03466	884 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	SNX41	Q04053	625 aa		1.42	□□□□□ -2.18
DOT6	YER088C	SEC13	Q04491	297 aa	Known RBP	1.42	□□□□□ -2.18
DOT6	YER088C	DYN1	P36022	4092 aa		1.41	□□□□□ -2.18
DOT6	YER088C	IMP3	P32899	183 aa	Predicted RBP	1.41	□□□□□ -2.18
DOT6	YER088C	LDB7	P38210	180 aa		1.41	□□□□□ -2.18
DOT6	YER088C	YHR045W	P38775	560 aa		1.41	□□□□□ -2.18
DOT6	YER088C	SMC2	P38989	1170 aa	Known RBP	1.41	□□□□□ -2.18
DOT6	YER088C	FET3	P38993	636 aa		1.41	□□□□□ -2.18
DOT6	YER088C	YIL059C	P40520	121 aa		1.41	□□□□□ -2.18
DOT6	YER088C	HYR1	P40581	163 aa	Known RBP	1.41	□□□□□ -2.18
DOT6	YER088C	JHD2	P47156	728 aa	Predicted RBP	1.41	□□□□□ -2.18
DOT6	YER088C	UFD1	P53044	361 aa		1.41	□□□□□ -2.18
DOT6	YER088C	BIO4	P53630	237 aa		1.41	□□□□□ -2.18
DOT6	YER088C	ERV25	P54837	211 aa	Known RBP	1.41	□□□□□ -2.18
DOT6	YER088C	YDR209C	Q03480	137 aa		1.41	□□□□□ -2.18
DOT6	YER088C	TPO4	Q12256	659 aa		1.41	□□□□□ -2.18
DOT6	YER088C	TFC7	Q12415	435 aa		1.41	□□□□□ -2.18
DOT6	YER088C	YAL063C-A	Q3E791	96 aa		1.41	□□□□□ -2.18
DOT6	YER088C	YOR032W-A	Q8TGS1	66 aa		1.41	□□□□□ -2.18
DOT6	YER088C	YCR025C	P25352	136 aa		1.4	□□□□□ -2.18
DOT6	YER088C	INO2	P26798	304 aa		1.4	□□□□□ -2.18
DOT6	YER088C	RIB7	P33312	244 aa		1.4	□□□□□ -2.18
DOT6	YER088C	PRP18	P33411	251 aa	Predicted RBP	1.4	□□□□□ -2.18
DOT6	YER088C	SDH4	P37298	181 aa		1.4	□□□□□ -2.18
DOT6	YER088C	MAL32	P38158	584 aa		1.4	□□□□□ -2.18
DOT6	YER088C	YPC1	P38298	316 aa		1.4	□□□□□ -2.18
DOT6	YER088C	ASP1	P38986	381 aa	Predicted RBP	1.4	□□□□□ -2.18
DOT6	YER088C	MNN9	P39107	395 aa	Known RBP	1.4	□□□□□ -2.18
DOT6	YER088C	YFR045W	P43617	309 aa		1.4	□□□□□ -2.18
DOT6	YER088C	HIT1	P46973	164 aa		1.4	□□□□□ -2.18
DOT6	YER088C	HOC1	P47124	396 aa		1.4	□□□□□ -2.18
DOT6	YER088C	UBC13	P52490	153 aa		1.4	□□□□□ -2.18
DOT6	YER088C	YGL118C	P53132	145 aa		1.4	□□□□□ -2.18
DOT6	YER088C	YLR446W	Q06204	433 aa		1.4	□□□□□ -2.18
DOT6	YER088C	HRT1	Q08273	121 aa		1.4	□□□□□ -2.18
DOT6	YER088C	BPH1	P25356	2167 aa		1.4	□□□□□ -2.19
DOT6	YER088C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.4	□□□□□ -2.19	not detected
DOT6	YER088C	CDC36	P06100	191 aa	Predicted RBP	1.4	□□□□□ -2.19
DOT6	YER088C	MEI4	P29467	408 aa		1.4	□□□□□ -2.19
DOT6	YER088C	LSM4	P40070	187 aa	Known RBP	1.4	□□□□□ -2.19
DOT6	YER088C	YJL144W	P47009	104 aa		1.4	□□□□□ -2.19
DOT6	YER088C	IBA57	P47158	497 aa		1.4	□□□□□ -2.19
DOT6	YER088C	CAX4	P53223	239 aa		1.4	□□□□□ -2.19
DOT6	YER088C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.4	□□□□□ -2.19	not detected
DOT6	YER088C	DXO1	Q06349	442 aa		1.4	□□□□□ -2.19
DOT6	YER088C	YLR413W	Q06689	675 aa		1.4	□□□□□ -2.19
DOT6	YER088C	DCP1	Q12517	231 aa	Predicted RBP	1.4	□□□□□ -2.19
DOT6	YER088C	RPL31A	P0C2H8	113 aa	Known RBP	1.39	□□□□□ -2.19
DOT6	YER088C	DBP3	P20447	523 aa	Known RBP	1.39	□□□□□ -2.19
DOT6	YER088C	SAR1	P20606	190 aa	Known RBP	1.39	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 125.5 ms