RNA–Protein interactions for RNA: YDR261W-B

YDR261W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-BYDR261W-B RRP17Q04031 235 aaPredicted RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B ORM2Q06144 216 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B DTD1Q07648 150 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B RAX2Q12465 1220 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B TPS2P31688 896 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B RFS1P38234 210 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B SHG1P38337 142 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B LSM12P38828 187 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B RRG9P40156 214 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B GRX8Q05926 109 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B CDC28P00546 298 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B CAT2P32796 670 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B ACT1P60010 375 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B MHP1P43638 1398 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B SCS3P53012 380 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B CRH1P53301 507 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B MRS1P07266 363 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B DRE2P36152 348 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B PSA1P41940 361 aaKnown RBP2.38□□□□□ -2.03
YDR261W-BYDR261W-B MRH4P53166 561 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B HEM25Q07534 307 aa2.38□□□□□ -2.03
YDR261W-BYDR261W-B SOL2P37262 315 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B ECM33P38248 429 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B YER186CP40101 306 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B FYV6P53913 173 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B RHO3Q00245 231 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B NUP49Q02199 472 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-HO13535 1793 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-DR5P0C2I2 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-DR6P0C2I3 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-LR2P0C2I5 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-LR3P0C2I6 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-PR1P0C2I9 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-PR2P0C2J0 1756 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-PR3P0C2J1 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-JR1P47098 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-ML2Q03434 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-ER1Q03612 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-ML1Q04711 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-GR2Q12269 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-OLQ12273 1755 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B TY1B-PLQ12414 1755 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B YOX1P34161 385 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B MRP21P38175 177 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B PGU1P47180 361 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B HMT1P38074 348 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B POP8P38208 133 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B SEN34P39707 275 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B LSM1P47017 172 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B YJL016WP47072 561 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B NRM1P53718 249 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B HRT3Q12347 344 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B QCR2P07257 368 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B VPH2P32341 215 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B YPT52P36018 234 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B BAT1P38891 393 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B CWC25P53854 179 aaKnown RBP2.37□□□□□ -2.03
YDR261W-BYDR261W-B FMP42Q04991 504 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B FSH2Q05015 223 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B GAS2Q06135 555 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B YLR177WQ06251 628 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B NSL1Q12143 216 aa2.37□□□□□ -2.03
YDR261W-BYDR261W-B URA10P30402 227 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B RMI1Q02685 241 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B YET3Q07451 203 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B YOR283WQ12040 230 aaKnown RBP2.36□□□□□ -2.03
YDR261W-BYDR261W-B PET20Q99373 253 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B TRS65P32893 560 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B ASK1P35734 292 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B MAM33P40513 266 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B AAH1P53909 347 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B TY2B-BQ12491 1770 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B DPM1P14020 267 aaKnown RBP2.36□□□□□ -2.03
YDR261W-BYDR261W-B NQM1P53228 333 aaPredicted RBP2.36□□□□□ -2.03
YDR261W-BYDR261W-B SRL1Q08673 210 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B COX5AP00424 153 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B LDS1P31379 325 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B DOG1P38774 246 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B ECM14P38836 430 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B EDC3P39998 551 aaKnown RBP2.36□□□□□ -2.03
YDR261W-BYDR261W-B YER076CP40049 302 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B PEX12Q04370 399 aa2.36□□□□□ -2.03
YDR261W-BYDR261W-B TCA17P32613 152 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B DER1P38307 211 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B PCI8P40512 444 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B REE1P40893 198 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B HAC1P41546 238 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B YJR056CP47115 236 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B BXI1P48558 297 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B SPC2Q04969 178 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B IZH2Q12442 317 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B NAG1Q8TGN9 163 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B HHF1P02309 103 aaKnown RBP2.35□□□□□ -2.03
YDR261W-BYDR261W-B GCN3P14741 305 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B CUP2P15315 225 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B YCR090CP25654 182 aaKnown RBP2.35□□□□□ -2.03
YDR261W-BYDR261W-B RSM25P40496 264 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B CLD1P53264 445 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B PEP1P32319 1579 aa2.35□□□□□ -2.03
YDR261W-BYDR261W-B MDH3P32419 343 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms