RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	MTQ1	P53944	314 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	CYT2	Q00873	224 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	PIR3	Q03180	325 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	YDR415C	Q04033	374 aa	Predicted RBP	4.86	□□□□□ -1.63
RPT2	YDL007W	YMR315W	Q04869	349 aa	Known RBP	4.86	□□□□□ -1.63
RPT2	YDL007W	PEX30	Q06169	523 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	MRX9	Q07349	420 aa	Known RBP	4.86	□□□□□ -1.63
RPT2	YDL007W	AKR2	Q12013	749 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	PRS5	Q12265	496 aa	Known RBP	4.86	□□□□□ -1.63
RPT2	YDL007W	YDL007C-A	Q2V2Q0	85 aa		4.86	□□□□□ -1.63
RPT2	YDL007W	TDH2	P00358	332 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	PPH21	P23594	369 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	TRX3	P25372	127 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	SUI1	P32911	108 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	MRPL4	P36517	319 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	YPT31	P38555	223 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	GPI16	P38875	610 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	PHO90	P39535	881 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	UIP3	P39547	235 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	YER010C	P40011	234 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	PUG1	P40100	303 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	SLZ1	P40167	298 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	PAU15	P40585	124 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	ALK1	P43633	760 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	YJR056C	P47115	236 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	BAT2	P47176	376 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	YJR149W	P47177	404 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	NUP57	P48837	541 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	PNC1	P53184	216 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	YNR061C	P53747	219 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	YIF1	P53845	314 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	APJ1	P53940	528 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	RBS1	Q05672	457 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	BSP1	Q06604	576 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	SKS1	Q12505	502 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	YIL134C-A	Q45U18	67 aa		4.85	□□□□□ -1.63
RPT2	YDL007W	PNO1	Q99216	274 aa	Known RBP	4.85	□□□□□ -1.63
RPT2	YDL007W	YOL162W	P0CF19	215 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	MTF1	P14908	341 aa	Known RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	STE4	P18851	423 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	MIR1	P23641	311 aa	Known RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	YCR100C	P25606	316 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	DEG1	P31115	442 aa	Known RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
RPT2	YDL007W	PRP18	P33411	251 aa	Predicted RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	MAL32	P38158	584 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	MOH1	P38191	138 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	TIM17	P39515	158 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	NOP16	P40007	231 aa	Known RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	YIL060W	P40519	144 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	OTU1	P43558	301 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	YJL163C	P46996	555 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	ADO1	P47143	340 aa	Known RBP	4.84	□□□□□ -1.63
RPT2	YDL007W	MDM34	P53083	459 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	YAP1802	P53309	568 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	MAL12	P53341	584 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	MSC1	Q03104	513 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	RUB1	Q03919	77 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	RRT7	Q07829	113 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	COX19	Q3E731	98 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	YNR034W-A	Q3E841	98 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	YOR338W	Q99326	363 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	TRA1	P38811	3744 aa		4.84	□□□□□ -1.63
RPT2	YDL007W	CET1	O13297	549 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	TPI1	P00942	248 aa	Known RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	COX9	P07255	59 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	CKA1	P15790	372 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	ADH7	P25377	361 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	PUT3	P25502	979 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	PBN1	P25580	416 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	EHD3	P28817	500 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	SSH4	P32343	579 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	YEF1	P32622	495 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	CSE2	P33308	149 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	PAN3	P36102	679 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	BNA4	P38169	460 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	YPC1	P38298	316 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	PRP39	P39682	629 aa	Known RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	LYS12	P40495	371 aa	Known RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	UFE1	P41834	346 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	HXT14	P42833	540 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	MOB2	P43563	287 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	COX16	P47081	118 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	COQ6	P53318	479 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	BUD25	P85052	153 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	STD1	Q02794	444 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	RSM10	Q03201	203 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	SEC13	Q04491	297 aa	Known RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	FCF2	Q12035	217 aa	Predicted RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	TPO4	Q12256	659 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	PDH1	Q12428	516 aa	Known RBP	4.83	□□□□□ -1.64
RPT2	YDL007W	COA6	Q3E846	104 aa		4.83	□□□□□ -1.64
RPT2	YDL007W	RPL9A	P05738	191 aa	Known RBP	4.82	□□□□□ -1.64
RPT2	YDL007W	RPS14A	P06367	137 aa	Known RBP	4.82	□□□□□ -1.64
RPT2	YDL007W	SGA1	P08019	549 aa		4.82	□□□□□ -1.64
RPT2	YDL007W	RIP1	P08067	215 aa		4.82	□□□□□ -1.64
RPT2	YDL007W	ATG15	P25641	520 aa		4.82	□□□□□ -1.64
RPT2	YDL007W	ADK2	P26364	225 aa		4.82	□□□□□ -1.64
RPT2	YDL007W	LAC1	P28496	418 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms