RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 STPG1Q5TH74 334 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 LIN9Q5TKA1 542 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 FAM171A1Q5VUB5 890 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 Q6ZS52 159 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 LONP2Q86WA8 852 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 ZNF713Q8N859 430 aaPredicted RBP10.82□□□□□ -0.68
PHGDH-212ENST00000641247 CNNM3Q8NE01 707 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 PIK3R5Q8WYR1 880 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
PHGDH-212ENST00000641247 DNASE1L2Q92874 299 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 ELSPBP1Q96BH3 223 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 TEKT3Q9BXF9 490 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 GLT8D2Q9H1C3 349 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 RBM28Q9NW13 759 aaKnown RBP10.82□□□□□ -0.68
PHGDH-212ENST00000641247 KCNH3Q9ULD8 1083 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 MRPS17Q9Y2R5 130 aaKnown RBP10.82□□□□□ -0.68
PHGDH-212ENST00000641247 FRYQ5TBA9 3013 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 SPEGQ15772 3267 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 FAM208BQ5VWN6 2430 aa10.82□□□□□ -0.68
PHGDH-212ENST00000641247 NOTCH4Q99466 2003 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 ESYT2A0FGR8 921 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 SRRM3A6NNA2 597 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-212ENST00000641247 MAN2B1O00754 1011 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 KIF4AO95239 1232 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 POU2F2P09086 479 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 ZNF806P0C7X5 589 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 CCNE1P24864 410 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 OR1D2P34982 312 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 RAB33AQ14088 237 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-212ENST00000641247 CREB3L3Q68CJ9 461 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 PSAPL1Q6NUJ1 521 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 CD300LGQ6UXG3 332 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 VITQ6UXI7 678 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 REXO1Q8N1G1 1221 aaKnown RBP10.81□□□□□ -0.68
PHGDH-212ENST00000641247 RNF149Q8NC42 400 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 TTPALQ9BTX7 342 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 CSRNP2Q9H175 543 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 DHX33Q9H6R0 707 aaKnown RBP10.81□□□□□ -0.68
PHGDH-212ENST00000641247 GIT1Q9Y2X7 761 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
PHGDH-212ENST00000641247 CASTOR2A6NHX0 329 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 ARNTLO00327 626 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 B4GALT5O43286 388 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 XYLBO75191 536 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 MOSPD3O75425 235 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 NR1I2O75469 434 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 ZIC2O95409 532 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-212ENST00000641247 TDP2O95551 362 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 ARF4P18085 180 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-212ENST00000641247 GDI1P31150 447 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 VIPR2P41587 438 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 SOX9P48436 509 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 NAB2Q15742 525 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 UVSSAQ2YD98 709 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 TCEAL6Q6IPX3 200 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 TXNDC11Q6PKC3 985 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 FERMT3Q86UX7 667 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 TCEAL3Q969E4 200 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 RSPRY1Q96DX4 576 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 TRMT61BQ9BVS5 477 aaKnown RBP10.8□□□□□ -0.68
PHGDH-212ENST00000641247 BRD9Q9H8M2 597 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 ANO2Q9NQ90 1003 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 XPNPEP1Q9NQW7 623 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 GDE1Q9NZC3 331 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 PIAS3Q9Y6X2 628 aa10.8□□□□□ -0.68
PHGDH-212ENST00000641247 FASNP49327 2511 aaKnown RBP10.8□□□□□ -0.68
PHGDH-212ENST00000641247 GOLGA8AA7E2F4 631 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 GOLGA8BA8MQT2 603 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PTGESO14684 152 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 ZBTB43O43298 467 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 CNR2P34972 360 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 RAP1GAPP47736 663 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PXNP49023 591 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-212ENST00000641247 USP11P51784 963 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PTENP60484 403 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PSMC5P62195 406 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 CREMQ03060 361 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 MBTD1Q05BQ5 628 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 FOXC1Q12948 553 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 GRIK3Q13003 919 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PTGDRQ13258 359 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 Q4G0T1 1027 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PLA2G2CQ5R387 149 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 SPEM1Q8N4L4 309 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 RDM1Q8NG50 284 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 ETNPPLQ8TBG4 499 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PSPC1Q8WXF1 523 aaKnown RBP10.79□□□□□ -0.68
PHGDH-212ENST00000641247 GATA6Q92908 595 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 CEP170P1Q96L14 293 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 ASB16Q96NS5 453 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 C6orf50Q9HD87 102 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
PHGDH-212ENST00000641247 AVENQ9NQS1 362 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-212ENST00000641247 PARP2Q9UGN5 583 aa10.79□□□□□ -0.68
PHGDH-212ENST00000641247 SF3B1O75533 1304 aaKnown RBP eCLIP10.79□□□□□ -0.688e-6■■■■■ 107
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms