RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 POMKQ9H5K3 350 aa19.96■□□□□ 0.79
VCX3A-203ENST00000612369 BLOC1S4Q9NUP1 217 aa19.96■□□□□ 0.79
VCX3A-203ENST00000612369 SRPRBQ9Y5M8 271 aaKnown RBP19.96■□□□□ 0.79
VCX3A-203ENST00000612369 CLIC4Q9Y696 253 aa19.96■□□□□ 0.79
VCX3A-203ENST00000612369 MORC2Q9Y6X9 1032 aaPredicted RBP19.96■□□□□ 0.79
VCX3A-203ENST00000612369 TMEM189-UBE2V1I3L0A0 370 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 ABLIM1O14639 778 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 KIF4AO95239 1232 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 PLCG1P19174 1290 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 ABCD1P33897 745 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 NCKAP1LP55160 1127 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 KARSQ15046 597 aaKnown RBP19.95■□□□□ 0.78
VCX3A-203ENST00000612369 PDXDC1Q6P996 788 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 DCLRE1AQ6PJP8 1040 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 ALKAL1Q6UXT8 129 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 RIN2Q8WYP3 895 aaPredicted RBP19.95■□□□□ 0.78
VCX3A-203ENST00000612369 RABGGTAQ92696 567 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 REEP2Q9BRK0 252 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 TTPALQ9BTX7 342 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 RHOBTB2Q9BYZ6 727 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 CXCL16Q9H2A7 254 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 PLEKHA4Q9H4M7 779 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 SLC38A7Q9NVC3 462 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 CCDC39Q9UFE4 941 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 MTMR6Q9Y217 621 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 USTQ9Y2C2 406 aa19.95■□□□□ 0.78
VCX3A-203ENST00000612369 NPHP3-ACAD11A0A0J9YXS1 232 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 SMIM28A0A1B0GU29 152 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 STX6O43752 255 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 DDIT3P35638 169 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 ZNF131P52739 623 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 TMC5Q6UXY8 1006 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 HAUS6Q7Z4H7 955 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 ZBTB33Q86T24 672 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 CEP120Q8N960 986 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 LARP4BQ92615 738 aaKnown RBP19.94■□□□□ 0.78
VCX3A-203ENST00000612369 PARVGQ9HBI0 331 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 MAN1C1Q9NR34 630 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 CACNG4Q9UBN1 327 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 HCN4Q9Y3Q4 1203 aa19.94■□□□□ 0.78
VCX3A-203ENST00000612369 ARIH1Q9Y4X5 557 aaPredicted RBP19.94■□□□□ 0.78
VCX3A-203ENST00000612369 CLDN3O15551 220 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 FAM13AO94988 1023 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 KRT18P05783 430 aaKnown RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 PDIA4P13667 645 aaKnown RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 OSTNP61366 133 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 CACNB1Q02641 598 aaPredicted RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 DHX8Q14562 1220 aaKnown RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 MCM6Q14566 821 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 NOLC1Q14978 699 aaKnown RBP eCLIP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 GLRA4Q5JXX5 417 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 FAM171A1Q5VUB5 890 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 PLCD3Q8N3E9 789 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 LRRC15Q8TF66 581 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 PIK3R5Q8WYR1 880 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 DDX27Q96GQ7 796 aaKnown RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 B3GALT6Q96L58 329 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 TSHZ2Q9NRE2 1034 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 CDH22Q9UJ99 828 aa19.93■□□□□ 0.78
VCX3A-203ENST00000612369 FBXO2Q9UK22 296 aaPredicted RBP19.93■□□□□ 0.78
VCX3A-203ENST00000612369 TRIP11Q15643 1979 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 TRAPPC3O43617 180 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 PAPLNO95428 1278 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 WEE2P0C1S8 567 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 KCNE1P15382 129 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 MARCKSP29966 332 aaPredicted RBP19.92■□□□□ 0.78
VCX3A-203ENST00000612369 TXLNAP40222 546 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 ZXDAP98168 799 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 MCL1Q07820 350 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 UPP1Q16831 310 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 RTP2Q5QGT7 225 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 KANK3Q6NY19 840 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 LILRA6Q6PI73 481 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.92■□□□□ 0.78
VCX3A-203ENST00000612369 ZDHHC14Q8IZN3 488 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 MYCT1Q8N699 235 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 HASPINQ8TF76 798 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 EPSTI1Q96J88 318 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 ZBTB45Q96K62 511 aaPredicted RBP19.92■□□□□ 0.78
VCX3A-203ENST00000612369 SNX27Q96L92 541 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 CNTN3Q9P232 1028 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 ANKFY1Q9P2R3 1169 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 STK17AQ9UEE5 414 aa19.92■□□□□ 0.78
VCX3A-203ENST00000612369 C2CD4DB7Z1M9 353 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 TGM5O43548 720 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 TRAK2O60296 914 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 TBCAO75347 108 aaKnown RBP19.91■□□□□ 0.78
VCX3A-203ENST00000612369 B3GAT3O94766 335 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 CLCNKBP51801 687 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 SLC39A14Q15043 492 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 KYAT1Q16773 422 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 PTPN21Q16825 1174 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 FAM173BQ6P4H8 233 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 TRIM67Q6ZTA4 783 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 CCDC149Q6ZUS6 474 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 CEP57Q86XR8 500 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 PALB2Q86YC2 1186 aa19.91■□□□□ 0.78
VCX3A-203ENST00000612369 TDRD5Q8NAT2 981 aaKnown RBP19.91■□□□□ 0.78
VCX3A-203ENST00000612369 LNX1Q8TBB1 728 aaPredicted RBP19.91■□□□□ 0.78
VCX3A-203ENST00000612369 FOXD4L1Q9NU39 408 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms