RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 CCDC73Q6ZRK6 1079 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 SPPL3Q8TCT6 385 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 PPP2R3CQ969Q6 453 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 C1QTNF2Q9BXJ5 285 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 GBP3Q9H0R5 595 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 NXF3Q9H4D5 531 aaKnown RBP11.39□□□□□ -0.59
SDF2-208ENST00000589788 ZHX3Q9H4I2 956 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 PDZD7Q9H5P4 517 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 NSUN3Q9H649 340 aaKnown RBP11.39□□□□□ -0.59
SDF2-208ENST00000589788 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 ARHGAP28Q9P2N2 729 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 PARP2Q9UGN5 583 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
SDF2-208ENST00000589788 CFAP45Q9UL16 551 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 ODF2LQ9ULJ1 636 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 HES2Q9Y543 173 aa11.39□□□□□ -0.59
SDF2-208ENST00000589788 CUTAO60888 179 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 POMCP01189 267 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 PBX3P40426 434 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 STAT6P42226 847 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 BCAR1P56945 870 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 MCCD1P59942 119 aaPredicted RBP11.38□□□□□ -0.59
SDF2-208ENST00000589788 UBE3AQ05086 875 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 ZBTB33Q86T24 672 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 MYCT1Q8N699 235 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 KCNG4Q8TDN1 519 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 MICAL1Q8TDZ2 1067 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 LRRC15Q8TF66 581 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 POF1BQ8WVV4 589 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 GAD1Q99259 594 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 MRPL4Q9BYD3 311 aaKnown RBP11.38□□□□□ -0.59
SDF2-208ENST00000589788 PANK2Q9BZ23 570 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 PRDM6Q9NQX0 595 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 GIT1Q9Y2X7 761 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 TRANK1O15050 2925 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 MYO7AQ13402 2215 aa11.38□□□□□ -0.59
SDF2-208ENST00000589788 ARL5CA6NH57 179 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 BRD1O95696 1058 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 AKAP5P24588 427 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 DNAJB1P25685 340 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 MLH1P40692 756 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 ME1P48163 572 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 SH3BP2P78314 561 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 DNM1Q05193 864 aaKnown RBP11.37□□□□□ -0.59
SDF2-208ENST00000589788 AAK1Q2M2I8 961 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 DCAF4L1Q3SXM0 396 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 TCEAL5Q5H9L2 206 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 NT5DC1Q5TFE4 455 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 BPHLQ86WA6 291 aaPredicted RBP11.37□□□□□ -0.59
SDF2-208ENST00000589788 PDILTQ8N807 584 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 MRPS27Q92552 414 aaKnown RBP11.37□□□□□ -0.59
SDF2-208ENST00000589788 ZNF592Q92610 1267 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 TMEM169Q96HH4 297 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 ZFP42Q96MM3 310 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 RPS6KC1Q96S38 1066 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 NTPCRQ9BSD7 190 aaKnown RBP11.37□□□□□ -0.59
SDF2-208ENST00000589788 NRDE2Q9H7Z3 1164 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 PARVGQ9HBI0 331 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 TLR9Q9NR96 1032 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 COG5Q9UP83 839 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 LZTS1Q9Y250 596 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 ATP6V1DQ9Y5K8 247 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 TDRD15B5MCY1 1934 aaKnown RBP11.37□□□□□ -0.59
SDF2-208ENST00000589788 ATG2AQ2TAZ0 1938 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 ZMYM2Q9UBW7 1377 aa11.37□□□□□ -0.59
SDF2-208ENST00000589788 NT5C1B-RDH14C9J2C7 533 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 K7ENM7 598 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 NCK2O43639 380 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 EDN1P05305 212 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 SCP2P22307 547 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 SCNN1GP51170 649 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 MRPS5P82675 430 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 CAMK1Q14012 370 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 GIT2Q14161 759 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 BMS1Q14692 1282 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 EEF1DP3Q658K8 133 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 PDE12Q6L8Q7 609 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 ZNF280BQ86YH2 543 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 FAM178BQ8IXR5 827 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 TMEM161BQ8NDZ6 487 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 BICD1Q96G01 975 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 ACO2Q99798 780 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 TARS2Q9BW92 718 aaKnown RBP11.36□□□□□ -0.59
SDF2-208ENST00000589788 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 KLK14Q9P0G3 267 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 DNAJB4Q9UDY4 337 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 TNFSF13BQ9Y275 285 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 USTQ9Y2C2 406 aa11.36□□□□□ -0.59
SDF2-208ENST00000589788 ZDHHC9Q9Y397 364 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms