RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	ZBTB33	Q86T24	672 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MYCT1	Q8N699	235 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SUSD6	Q92537	303 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	RABGGTA	Q92696	567 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	BICD1	Q96G01	975 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SNX27	Q96L92	541 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	KLHL5	Q96PQ7	755 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PPP1R10	Q96QC0	940 aa	Known RBP	11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PAAF1	Q9BRP4	392 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TCHP	Q9BT92	498 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ZHX3	Q9H4I2	956 aa		11.97	□□□□□ -0.49
PPP4R1-208	ENST00000578178	VWA8	A3KMH1	1905 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	C2CD2L	O14523	706 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	HNRNPDL	O14979	420 aa	Known RBP	11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TRAK2	O60296	914 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TADA2A	O75478	443 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	PIGR	P01833	764 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ADH1A	P07327	375 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CNP	P09543	421 aa	Known RBP	11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	EPCAM	P16422	314 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CLCN4	P51793	760 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	OSTN	P61366	133 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	MCL1	Q07820	350 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	USP41	Q3LFD5	358 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	XKR4	Q5GH76	650 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	KIAA1841	Q6NSI8	718 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	GPR65	Q8IYL9	337 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SPRYD3	Q8NCJ5	442 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	HASPIN	Q8TF76	798 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	SLC22A17	Q8WUG5	538 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ZBTB45	Q96K62	511 aa	Predicted RBP	11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	UROC1	Q96N76	676 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	ACAP3	Q96P50	834 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	FIZ1	Q96SL8	496 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	GPR62	Q9BZJ7	368 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	S1PR5	Q9H228	398 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	CHST7	Q9NS84	486 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	TBX20	Q9UMR3	447 aa		11.96	□□□□□ -0.49
PPP4R1-208	ENST00000578178	DENND4A	Q7Z401	1863 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178		A0A087X0B3	334 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	TMEM189-UBE2V1	I3L0A0	370 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	TEX28	O15482	410 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CLDN3	O15551	220 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KLRC2	P26717	231 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	MATR3	P43243	847 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	9e-6	■■■■□ 21.7
PPP4R1-208	ENST00000578178	LIG4	P49917	911 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CREM	Q03060	361 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ITIH3	Q06033	890 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ELAVL2	Q12926	359 aa	Known RBP	11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	PKP1	Q13835	747 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CBX2	Q14781	532 aa	Predicted RBP	11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KIAA0319	Q5VV43	1072 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CES5A	Q6NT32	575 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ALKAL1	Q6UXT8	129 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SV2B	Q7L1I2	683 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	DYM	Q7RTS9	669 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	TAS1R1	Q7RTX1	841 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SFR1	Q86XK3	245 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	MAP4K3	Q8IVH8	894 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KCNG4	Q8TDN1	519 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	DDX12P	Q92771	950 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	3e-7	■□□□□ 9.6
PPP4R1-208	ENST00000578178	APOL5	Q9BWW9	433 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	PHF7	Q9BWX1	381 aa	Predicted RBP	11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ST6GALNAC4	Q9H4F1	302 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SFXN1	Q9H9B4	322 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	RXFP1	Q9HBX9	757 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SLC38A7	Q9NVC3	462 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CNTN3	Q9P232	1028 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	TFIP11	Q9UBB9	837 aa	Known RBP	11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SEL1L	Q9UBV2	794 aa		11.95	□□□□□ -0.5
PPP4R1-208	ENST00000578178	C5orf42	Q9H799	3197 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SMIM28	A0A1B0GU29	152 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	MYMK	A6NI61	221 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	CUTA	O60888	179 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	GLUD1	P00367	558 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KCNE1	P15382	129 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	GAP43	P17677	238 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	NMT1	P30419	496 aa	Known RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	GTF2B	Q00403	316 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	KYAT1	Q16773	422 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	RTP2	Q5QGT7	225 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	RARS2	Q5T160	578 aa	Known RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ATL3	Q6DD88	541 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	PDILT	Q8N807	584 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	RIN2	Q8WYP3	895 aa	Predicted RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	DNAJC19	Q96DA6	116 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	B3GALT6	Q96L58	329 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	FBXL18	Q96ME1	805 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ZMAT2	Q96NC0	199 aa	Known RBP	11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	NECTIN4	Q96NY8	510 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	HAPLN2	Q9GZV7	340 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	ADAM7	Q9H2U9	754 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	GOLGA2P5	Q9HBQ8	144 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	C2orf16	Q68DN1	1984 aa		11.94	□□□□□ -0.5
PPP4R1-208	ENST00000578178	SPDYE4	A6NLX3	237 aa		11.93	□□□□□ -0.5
PPP4R1-208	ENST00000578178	LOC730098	B7Z3J9	87 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms