RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CAPN8A6NHC0 703 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 MATN2O00339 956 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 CNOT4O95628 575 aaKnown RBP5.9□□□□□ -1.46
LINC00560-201ENST00000564593 MALP21145 153 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 FPR1P21462 350 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 SMARCA1P28370 1054 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 PCSK1P29120 753 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 GZMKP49863 264 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ZNF280AP59817 542 aaPredicted RBP5.9□□□□□ -1.46
LINC00560-201ENST00000564593 FAM193AP78312 1265 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ATP8B2P98198 1209 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 TLE1Q04724 770 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 SNAPC2Q13487 334 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 MTM1Q13496 603 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 RIN1Q13671 783 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 RNF220Q5VTB9 566 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 IL31Q6EBC2 164 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ARHGEF18Q6ZSZ5 1173 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ZNF572Q7Z3I7 529 aaPredicted RBP5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ADGRE4PQ86SQ3 457 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 SHCBP1Q8NEM2 672 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 FBXO41Q8TF61 875 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 CASKIN2Q8WXE0 1202 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 IL17RAQ96F46 866 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 NEIL1Q96FI4 390 aaPredicted RBP5.9□□□□□ -1.46
LINC00560-201ENST00000564593 SLC35A4Q96G79 324 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 C20orf173Q96LM9 149 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 USP40Q9NVE5 1235 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 MOCS1Q9NZB8 636 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ABCF2Q9UG63 623 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ACTL7AQ9Y615 435 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ZMYM3Q14202 1370 aa5.9□□□□□ -1.46
LINC00560-201ENST00000564593 ADAMTS20P59510 1910 aa5.9□□□□□ -1.47
LINC00560-201ENST00000564593 A0A1W2PRX2 142 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ANO9A1A5B4 782 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PMS2P1A4D2B8 440 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CACNB3P54284 484 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CTXN1P60606 82 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PPP2CBP62714 309 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 RAB1AP62820 205 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PPP2CAP67775 309 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 NKX6-1P78426 367 aaPredicted RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 SP140Q13342 867 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CNN3Q15417 329 aaKnown RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 SVIPQ8NHG7 77 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 MTFMTQ96DP5 389 aaKnown RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 FAM167AQ96KS9 214 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 DPYSL5Q9BPU6 564 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ENKD1Q9H0I2 346 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ZNF700Q9H0M5 742 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 EPC1Q9H2F5 836 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 BHMT2Q9H2M3 363 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PNPOQ9NVS9 261 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 RUVBL1Q9Y265 456 aaKnown RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CFAP69A5D8W1 941 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 GOLIM4O00461 696 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 WNT10BO00744 389 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PMM2O15305 246 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 TEX33O43247 280 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CDC14BO60729 498 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 RAP2AP10114 183 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 TYRP14679 529 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ALOX15P16050 662 aaPredicted RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CR2P20023 1033 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 NEK3P51956 506 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 GPSM2P81274 684 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 BIRC2Q13490 618 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 FGL2Q14314 439 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PLS1Q14651 629 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 BRD3Q15059 726 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 FAM47AQ5JRC9 791 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 MFSD14BQ5SR56 506 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 MAEAQ7L5Y9 396 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 SP8Q8IXZ3 490 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 SYT8Q8NBV8 401 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ARL8AQ96BM9 186 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 CEP95Q96GE4 821 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 LRRC37BQ96QE4 947 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 LMF1Q96S06 567 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 TCF25Q9BQ70 676 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 AGO3Q9H9G7 860 aaKnown RBP5.89□□□□□ -1.47
LINC00560-201ENST00000564593 STAP2Q9UGK3 403 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 OAZ3Q9UMX2 235 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 PCDHGB6Q9Y5F9 930 aa5.89□□□□□ -1.47
LINC00560-201ENST00000564593 ATRNL1Q5VV63 1379 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 ALDH1A3P47895 512 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 FLT3LGP49771 235 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 CREMQ03060 361 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 PTH1RQ03431 593 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 MRPL49Q13405 166 aaKnown RBP5.88□□□□□ -1.47
LINC00560-201ENST00000564593 SEMA5AQ13591 1074 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 ATP2B3Q16720 1220 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 FLYWCH1Q4VC44 716 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 AFMIDQ63HM1 303 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 SWSAP1Q6NVH7 229 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 COL23A1Q86Y22 540 aaPredicted RBP5.88□□□□□ -1.47
LINC00560-201ENST00000564593 GPR135Q8IZ08 494 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 PMM1Q92871 262 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 NT5C1BQ96P26 610 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms