RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 PRELPP51888 382 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 COPS2P61201 443 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 VPS37BQ9H9H4 285 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 OLFML3Q9NRN5 406 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 ATF2P15336 505 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 MSH2P43246 934 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 NRLP54845 237 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 AP3B2Q13367 1082 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 ECHDC2Q86YB7 292 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 NKIRAS1Q9NYS0 192 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 PI4KBQ9UBF8 816 aa18.21■□□□□ 0.51
PPP4R3A-208ENST00000555462 TP73O15350 636 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 ASAP2O43150 1006 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 CYP11B1P15538 503 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 GAD2Q05329 585 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 Q4G0T1 1027 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 C1orf220Q5T0J3 134 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 CGB2Q6NT52 195 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 HAUS6Q7Z4H7 955 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 FHDC1Q9C0D6 1143 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 SAYSD1Q9NPB0 183 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 NINJ2Q9NZG7 142 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 KLHL14Q9P2G3 628 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 C15orf41Q9Y2V0 281 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 TNRC6CQ9HCJ0 1690 aaKnown RBP18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 BHMG1C9JSJ3 638 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 PODXLO00592 558 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 RTN2O75298 545 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 GAP43P17677 238 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 CEP55Q53EZ4 464 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 COL23A1Q86Y22 540 aaPredicted RBP18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 CRYGNQ8WXF5 182 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 MKL1Q969V6 931 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 NACC1Q96RE7 527 aa18.2■□□□□ 0.5
PPP4R3A-208ENST00000555462 PSMD10O75832 226 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 UGCGQ16739 394 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 TTC8Q8TAM2 541 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 ART4Q93070 314 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 PRMT6Q96LA8 375 aaPredicted RBP18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 MYLK2Q9H1R3 596 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 AFF2P51816 1311 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 ENTPD5O75356 428 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 STAT2P52630 851 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 SIX1Q15475 284 aaPredicted RBP18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 ARMC9Q7Z3E5 817 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 TRIM6Q9C030 488 aaPredicted RBP18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 GGA2Q9UJY4 613 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 DNAH12Q6ZR08 3092 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 BBOX1O75936 387 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 CTNNA2P26232 953 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 PSEN1P49768 467 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 KIF22Q14807 665 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 SLMAPQ14BN4 828 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 TAF11Q15544 211 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 P3H1Q32P28 736 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 BZW1Q7L1Q6 419 aaKnown RBP18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 CYFIP1Q7L576 1253 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 LRRN4Q8WUT4 740 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 BICD1Q96G01 975 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 ADAM22Q9P0K1 906 aa18.19■□□□□ 0.5
PPP4R3A-208ENST00000555462 ABCA3Q99758 1704 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 A0A1W2PPM1 405 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 EME2A4GXA9 379 aaPredicted RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ITGB5P18084 799 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 EPHB2P29323 1055 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 BMT2Q1RMZ1 405 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 XKR9Q5GH70 373 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ANKLE1Q8NAG6 615 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 XXYLT1Q8NBI6 393 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 POLR3CQ9BUI4 534 aaPredicted RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 A1CFQ9NQ94 594 aaKnown RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 NFIBO00712 420 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZNF131P52739 623 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 PKN2Q16513 984 aaKnown RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 IZUMO3Q5VZ72 239 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZNF668Q96K58 619 aaPredicted RBP18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 FAM213AQ9BRX8 229 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ATP6V0A4Q9HBG4 840 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 PCYOX1Q9UHG3 505 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 ZHX2Q9Y6X8 837 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
PPP4R3A-208ENST00000555462 LAMB2P55268 1798 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 EFTUD2Q15029 972 aaKnown RBP eCLIP18.17■□□□□ 0.57e-10■■■■□ 23.1
PPP4R3A-208ENST00000555462 EIF1ADQ8N9N8 165 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 DTX3LQ8TDB6 740 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 EXOC1LA0A1B0GW35 172 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 GTPBP10A4D1E9 387 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 TTC4O95801 387 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 ALAS1P13196 640 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 WDR4P57081 412 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 TAS2R40P59535 323 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 SNRNP35Q16560 246 aaKnown RBP18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 TLDC1Q6P9B6 456 aa18.17■□□□□ 0.5
PPP4R3A-208ENST00000555462 FAXDC2Q96IV6 333 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms