RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CDCA2Q69YH5 1023 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-206ENST00000543881 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 PADI6Q6TGC4 694 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 SHDQ96IW2 340 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 PRKD2Q9BZL6 878 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 FZD8Q9H461 694 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 POLD4Q9HCU8 107 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 CHST7Q9NS84 486 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 USP20Q9Y2K6 914 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
GABPB1-206ENST00000543881 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
GABPB1-206ENST00000543881 C1RP00736 705 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 EDN1P05305 212 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 CYP11B2P19099 503 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 GPC5P78333 572 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 B3GALT6Q96L58 329 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 RPP25Q9BUL9 199 aaKnown RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 TRIM6Q9C030 488 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 SPATA6Q9NWH7 488 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 KLK14Q9P0G3 267 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 NCDNQ9UBB6 729 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 PCDHB6Q9Y5E3 794 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 ARHGEF35A5YM69 484 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 NR1I2O75469 434 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FSHRP23945 695 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 PTGDRQ13258 359 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 GNL2Q13823 731 aaKnown RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 ZNF528Q3MIS6 628 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FGF14Q92915 247 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 COLEC11Q9BWP8 271 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 BCO2Q9BYV7 579 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 CCDC113Q9H0I3 377 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 PDZD7Q9H5P4 517 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 CACNG4Q9UBN1 327 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 FBXO4Q9UKT5 387 aa13.1□□□□□ -0.31
GABPB1-206ENST00000543881 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-206ENST00000543881 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 SPTLC1O15269 473 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 ZMYND10O75800 440 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 CD2BP2O95400 341 aaKnown RBP13.09□□□□□ -0.31
GABPB1-206ENST00000543881 SDHBP21912 280 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 MUTP22033 750 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 CCT6AP40227 531 aaKnown RBP13.09□□□□□ -0.31
GABPB1-206ENST00000543881 IL17AQ16552 155 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 USP41Q3LFD5 358 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 FUT10Q6P4F1 479 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 PARM1Q6UWI2 310 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 IGSF22Q8N9C0 903 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 GPR62Q9BZJ7 368 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
GABPB1-206ENST00000543881 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
GABPB1-206ENST00000543881 MTF2Q9Y483 593 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-206ENST00000543881 PP2D1A8MPX8 630 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 RPL17P18621 184 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 NAMPTP43490 491 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 CSTF1Q05048 431 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 PDIA5Q14554 519 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 MLF2Q15773 248 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 HAUS3Q68CZ6 603 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 ZBTB8OSQ8IWT0 167 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 PAAF1Q9BRP4 392 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 DDX23Q9BUQ8 820 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 C2orf40Q9H1Z8 148 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 BHMT2Q9H2M3 363 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
GABPB1-206ENST00000543881 CDH7Q9ULB5 785 aa13.08□□□□□ -0.32
GABPB1-206ENST00000543881 KIAA1024Q9UPX6 916 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms