RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FLRT1Q9NZU1 646 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 AOX1Q06278 1338 aa1.36□□□□□ -2.19
COPB1-212ENST00000534771 ST20-MTHFSA0A0A6YYL1 179 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 A0A1B0GTW7 788 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 TP73O15350 636 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 PJA2O43164 708 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 PEX1O43933 1283 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 MOSPD3O75425 235 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ITGA10O75578 1167 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 GLRX3O76003 335 aaKnown RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 STK10O94804 968 aaKnown RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 NTN1O95631 604 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 GPANK1O95872 356 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 LTA4HP09960 611 aaKnown RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 PRR35P0CG20 571 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 KELP23276 732 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 CD40P25942 277 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 IGFALSP35858 605 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 CCT4P50991 539 aaKnown RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 FOXG1P55316 489 aaPredicted RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 PROK1P58294 105 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 TUBA4AP68366 448 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 CXADRP78310 365 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 MGAT5Q09328 741 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 UBXN2BQ14CS0 331 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 KAZNQ674X7 775 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 FBXL22Q6P050 247 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 FOXR2Q6PJQ5 311 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ABHD15Q6UXT9 468 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ESPNLQ6ZVH7 1005 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 UBE2R2Q712K3 238 aaPredicted RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 THNSL2Q86YJ6 484 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 PASD1Q8IV76 773 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 COLGALT2Q8IYK4 626 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 LNX2Q8N448 690 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 VGLL2Q8N8G2 317 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 MDM1Q8TC05 714 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 TMEM255BQ8WV15 326 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 SNX33Q8WV41 574 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 NACC2Q96BF6 587 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ARMC5Q96C12 935 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 RNF31Q96EP0 1072 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ZNF496Q96IT1 587 aaPredicted RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 ZNF48Q96MX3 618 aaPredicted RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 FDXACB1Q9BRP7 624 aaPredicted RBP1.35□□□□□ -2.19
COPB1-212ENST00000534771 WACQ9BTA9 647 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 RNPEPQ9H4A4 650 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 TRIM39Q9HCM9 518 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 KCTD5Q9NXV2 234 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 GPRC5DQ9NZD1 345 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 B4GALT6Q9UBX8 382 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 KCNG1Q9UIX4 513 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ZKSCAN5Q9Y2L8 839 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 ENTPD2Q9Y5L3 495 aa1.35□□□□□ -2.19
COPB1-212ENST00000534771 POLR2AP24928 1970 aaKnown RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 ZBTB7CA1YPR0 619 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 UNCXA6NJT0 531 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 YY2O15391 372 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 OPA1O60313 960 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 PRAMEF4O60810 478 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ASLP04424 464 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 PFKMP08237 780 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SNRPA1P09661 255 aaKnown RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 SNHG28P0DPA3 235 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ITPKBP27987 946 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 PTPN7P35236 360 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 FLT3P36888 993 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 GRIA3P42263 894 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 FLT3LGP49771 235 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 VAV2P52735 878 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 POLGP54098 1239 aaPredicted RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 KRTAP10-1P60331 282 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 LRRC32Q14392 662 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 RASA3Q14644 834 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 LLGL1Q15334 1064 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 CYP2A13Q16696 494 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 MFSD14BQ5SR56 506 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 TSTD2Q5T7W7 516 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ZNF626Q68DY1 528 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SLC9A4Q6AI14 798 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 FCRLBQ6BAA4 426 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ESRP1Q6NXG1 681 aaKnown RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 GLB1L2Q8IW92 636 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ZSWIM2Q8NEG5 633 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SEMA6DQ8NFY4 1073 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SLC35B2Q8TB61 432 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 RSAD2Q8WXG1 361 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SARAFQ96BY9 339 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 CEP95Q96GE4 821 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 FUBP3Q96I24 572 aaKnown RBP eCLIP1.34□□□□□ -2.19
COPB1-212ENST00000534771 ZSWIM1Q9BR11 485 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 NRIP3Q9NQ35 241 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 ANLNQ9NQW6 1124 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 OXSMQ9NWU1 459 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 WWOXQ9NZC7 414 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 SIRPGQ9P1W8 387 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 EVLQ9UI08 416 aaPredicted RBP1.34□□□□□ -2.19
COPB1-212ENST00000534771 PRSS50Q9UI38 385 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 MSRAQ9UJ68 235 aa1.34□□□□□ -2.19
COPB1-212ENST00000534771 KCNE5Q9UJ90 142 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms