RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 SMTNP53814 917 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 RAD51AP2Q09MP3 1159 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 FBXL6Q8N531 539 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 FEZF2Q8TBJ5 459 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 AK8Q96MA6 479 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 NTPCRQ9BSD7 190 aaKnown RBP28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 KCND2Q9NZV8 630 aa28.46■■■□□ 2.15
LAPTM4B-203ENST00000521545 TGM5O43548 720 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 BMP15O95972 392 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 PLA2G4BP0C869 781 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 RPL17P18621 184 aaKnown RBP28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 GRM5P41594 1212 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 STRN3Q13033 797 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 RTP2Q5QGT7 225 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 PRSS55Q6UWB4 352 aaPredicted RBP28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 BRAPQ7Z569 592 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 ASIC4Q96FT7 647 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 TARS2Q9BW92 718 aaKnown RBP28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 RHOBTB2Q9BYZ6 727 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 CDT1Q9H211 546 aa28.45■■■□□ 2.14
LAPTM4B-203ENST00000521545 SLC26A4O43511 780 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 ASGR2P07307 311 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PLS3P13797 630 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 UBA7P41226 1012 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 GLRA4Q5JXX5 417 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PDXDC1Q6P996 788 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 DCLRE1AQ6PJP8 1040 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 TAS1R3Q7RTX0 852 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 SPIRE2Q8WWL2 714 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 SMG7Q92540 1137 aaKnown RBP28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 CALML4Q96GE6 196 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 UROC1Q96N76 676 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PPP1R10Q96QC0 940 aaKnown RBP28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PIDD1Q9HB75 910 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PTPRHQ9HD43 1115 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 PLXNA3P51805 1871 aa28.44■■■□□ 2.14
LAPTM4B-203ENST00000521545 MYO10Q9HD67 2058 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 RFPL2O75678 378 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 MCF2P10911 925 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 SLC12A3P55017 1021 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 OSTNP61366 133 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 TMEM119Q4V9L6 283 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 LILRA6Q6PI73 481 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 PIK3R5Q8WYR1 880 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 STAMQ92783 540 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 ZDHHC7Q9NXF8 308 aa28.43■■■□□ 2.14
LAPTM4B-203ENST00000521545 SMIM28A0A1B0GU29 152 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 B3GAT3O94766 335 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 BRD1O95696 1058 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 PSMD5Q16401 504 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 MPZL3Q6UWV2 235 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 CEP120Q8N960 986 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 ACAP3Q96P50 834 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 WDR6Q9NNW5 1121 aaKnown RBP28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 MUC6Q6W4X9 2439 aa28.42■■■□□ 2.14
LAPTM4B-203ENST00000521545 TRAPPC3O43617 180 aa28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 PDCP20941 246 aa28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 LNX1Q8TBB1 728 aaPredicted RBP28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 SLC38A7Q9NVC3 462 aa28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 LARSQ9P2J5 1176 aaKnown RBP28.41■■■□□ 2.14
LAPTM4B-203ENST00000521545 VPS37CA5D8V6 355 aaPredicted RBP28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 H0YCG3 227 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 TMEM189-UBE2V1I3L0A0 370 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 CLCNKBP51801 687 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 CUL4AQ13619 759 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 TMEM161BQ8NDZ6 487 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 RASSF8Q8NHQ8 419 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 DDX27Q96GQ7 796 aaKnown RBP28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 PRRX2Q99811 253 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 CLSTN3Q9BQT9 956 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 DENND4AQ7Z401 1863 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 CLUHO75153 1309 aa28.4■■■□□ 2.14
LAPTM4B-203ENST00000521545 C2orf16Q68DN1 1984 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 TOM1L1O75674 476 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 HARSP12081 509 aaKnown RBP28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 PROZP22891 400 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 GBP2P32456 591 aaPredicted RBP28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 LONP1P36776 959 aaKnown RBP28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 UPP1Q16831 310 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 XKR4Q5GH76 650 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 ALKAL1Q6UXT8 129 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 ZNF707Q96C28 371 aaPredicted RBP28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 PRKD2Q9BZL6 878 aa28.39■■■□□ 2.14
LAPTM4B-203ENST00000521545 ZNF318Q5VUA4 2279 aa28.39■■■□□ 2.13
LAPTM4B-203ENST00000521545 MTCL1Q9Y4B5 1905 aaKnown RBP28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 NPHP3-ACAD11A0A0J9YXS1 232 aa28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 ZMYND10O75800 440 aa28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 MAPTP10636 758 aaKnown RBP28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 SF3A1Q15459 793 aaKnown RBP28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 LIN9Q5TKA1 542 aa28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 ZBTB45Q96K62 511 aaPredicted RBP28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 GOLGA2P5Q9HBQ8 144 aa28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 ANKFY1Q9P2R3 1169 aa28.38■■■□□ 2.13
LAPTM4B-203ENST00000521545 PAPLNO95428 1278 aa28.37■■■□□ 2.13
LAPTM4B-203ENST00000521545 FGFR3P22607 806 aa28.37■■■□□ 2.13
LAPTM4B-203ENST00000521545 HOXD11P31277 338 aaPredicted RBP28.37■■■□□ 2.13
LAPTM4B-203ENST00000521545 MATR3P43243 847 aaKnown RBP eCLIP28.37■■■□□ 2.13
LAPTM4B-203ENST00000521545 DHX8Q14562 1220 aaKnown RBP28.37■■■□□ 2.13
LAPTM4B-203ENST00000521545 ARSHQ5FYA8 562 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms