RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 ANKMY2Q8IV38 441 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SIX5Q8N196 739 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 PPP4R1Q8TF05 950 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 MAML1Q92585 1016 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 DTNBP1Q96EV8 351 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 UNC45AQ9H3U1 944 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SLITRK6Q9H5Y7 841 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 CHST7Q9NS84 486 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 BTBD7Q9P203 1132 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 TMCO1Q9UM00 188 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 FAF1Q9UNN5 650 aaPredicted RBP7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 SH3GLB1Q9Y371 365 aa7.72□□□□□ -1.17
LIMCH1-207ENST00000508466 ADAMTS13Q76LX8 1427 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC195A0A1B0GUA6 201 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 FAM237BA0A1B0GVD1 139 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 TCRBV5S4A2TA0A5A2 114 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 CAPN8A6NHC0 703 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 VILLO15195 856 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 DDX3YO15523 660 aaKnown RBP7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 RAD21O60216 631 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ZMPSTE24O75844 475 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ZSCAN5DPP0CG00 497 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 POTEJP0CG39 1038 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ZBTB48P10074 688 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PEX2P28328 305 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PTGIRP43119 386 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ITGA8P53708 1063 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 IL9RQ01113 521 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 DSG1Q02413 1049 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ITGA7Q13683 1181 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 EFTUD2Q15029 972 aaKnown RBP eCLIP7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 SEC23AQ15436 765 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PARP6Q2NL67 630 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 MMEL1Q495T6 779 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 FIGNQ5HY92 759 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 SYDE2Q5VT97 1194 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 RNF43Q68DV7 783 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 LVRNQ6Q4G3 990 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ST13P4Q8IZP2 240 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PPM1KQ8N3J5 372 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 ZFP28Q8NHY6 868 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 LNX1Q8TBB1 728 aaPredicted RBP7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 CCDC127Q96BQ5 260 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 CNBD2Q96M20 576 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 NACAP1Q9BZK3 213 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PCDHA6Q9UN73 950 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 PCDHA8Q9Y5H6 950 aa7.71□□□□□ -1.17
LIMCH1-207ENST00000508466 MYH3P11055 1940 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 KRT18P05783 430 aaKnown RBP7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SNRPA1P09661 255 aaKnown RBP7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SERPINB6P35237 376 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SFSWAPQ12872 951 aaKnown RBP7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 WASHC2DQ5SRD0 308 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 ITPRIPL1Q6GPH6 555 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 DPY19L2Q6NUT2 758 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 TMTC3Q6ZXV5 915 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC65Q8IXS2 484 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 METTL25Q8N6Q8 603 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SPATA5Q8NB90 893 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC20A1Q8WUM9 679 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 FAM84AQ96KN4 292 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 MAGEB18Q96M61 343 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 BTBD10Q9BSF8 475 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 BHMT2Q9H2M3 363 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 SYNCQ9H7C4 482 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 KLHL11Q9NVR0 708 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 TMOD2Q9NZR1 351 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 STX8Q9UNK0 236 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 MYO5BQ9ULV0 1848 aa7.71□□□□□ -1.18
LIMCH1-207ENST00000508466 USP17L3A6NCW0 530 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 USP17L4A6NCW7 530 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 UNCXA6NJT0 531 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 AGRPO00253 132 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ETS1P14921 441 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC25A3Q00325 362 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 KRT17Q04695 432 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 NADK2Q4G0N4 442 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 EPC2Q52LR7 807 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TCHHL1Q5QJ38 904 aaPredicted RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 ARHGEF18Q6ZSZ5 1173 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 USP17L1Q7RTZ2 530 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 KRT27Q7Z3Y8 459 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 GIPC3Q8TF64 312 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC5A5Q92911 643 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 DYNLL2Q96FJ2 89 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 CEP295NLQ96MC4 621 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PANX3Q96QZ0 392 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 RBM15Q96T37 977 aaKnown RBP eCLIP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PRPF18Q99633 342 aaKnown RBP7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 VPS37BQ9H9H4 285 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 BLOC1S4Q9NUP1 217 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 COMMD3-BMI1R4GMX3 469 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PIK3C2BO00750 1634 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 PITPNM2Q9BZ72 1349 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 LOC100653049A0A140TA62 436 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 O00370 1275 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 KRT34O76011 436 aa7.7□□□□□ -1.18
LIMCH1-207ENST00000508466 TDP2O95551 362 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms