RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
PRDM2-213ENST00000503842 POU5F1Q01860 360 aaKnown RBP14.49□□□□□ -0.09
PRDM2-213ENST00000503842 BFSP1Q12934 665 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 KYAT1Q16773 422 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 MIIPQ5JXC2 388 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 FAM43BQ6ZT52 329 aaPredicted RBP14.49□□□□□ -0.09
PRDM2-213ENST00000503842 CREBRFQ8IUR6 639 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 THNSL1Q8IYQ7 743 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 CEP120Q8N960 986 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 NAP1L5Q96NT1 182 aaPredicted RBP14.49□□□□□ -0.09
PRDM2-213ENST00000503842 INTS13Q9NVM9 706 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 IFNKQ9P0W0 207 aa14.49□□□□□ -0.09
PRDM2-213ENST00000503842 TET1Q8NFU7 2136 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 DNAH12Q6ZR08 3092 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM43BA6NCK2 446 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 LGALS16A8MUM7 142 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 CXCL10P02778 98 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 CLTAP09496 248 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 STAG3L1P0CL83 205 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 KRT13P13646 458 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 UBASH3AP57075 661 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 PPP2R3AQ06190 1150 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 PSMD6Q15008 389 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 SEZ6Q53EL9 994 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 PLEKHG4Q58EX7 1191 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 C1orf220Q5T0J3 134 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 TWF2Q6IBS0 349 aaKnown RBP14.48□□□□□ -0.09
PRDM2-213ENST00000503842 PARD3BQ8TEW8 1205 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 SLC35C1Q96A29 364 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM43Q96BQ3 446 aaPredicted RBP14.48□□□□□ -0.09
PRDM2-213ENST00000503842 TRAIPQ9BWF2 469 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 IFIH1Q9BYX4 1025 aaKnown RBP14.48□□□□□ -0.09
PRDM2-213ENST00000503842 PPP1R12CQ9BZL4 782 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 XPO4Q9C0E2 1151 aaKnown RBP14.48□□□□□ -0.09
PRDM2-213ENST00000503842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.48□□□□□ -0.09
PRDM2-213ENST00000503842 SCN5AQ14524 2016 aa14.48□□□□□ -0.09
PRDM2-213ENST00000503842 MEFVO15553 781 aaPredicted RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 CBFA2T2O43439 604 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 PRKCSHP14314 528 aaPredicted RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 VAMP7P51809 220 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 ZNF75DP51815 510 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 CCL23P55773 120 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 WNT7BP56706 349 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 NR1I3Q14994 352 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 ENOX2Q16206 610 aaKnown RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 VWA3BQ502W6 1294 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 DMRTA1Q5VZB9 504 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 TMEM192Q8IY95 271 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 SMG8Q8ND04 991 aaKnown RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 LINC01599Q8WXQ3 324 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 SCLYQ96I15 445 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM5Q9C035 493 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 VPS16Q9H269 839 aa14.47□□□□□ -0.09
PRDM2-213ENST00000503842 NXF3Q9H4D5 531 aaKnown RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 RBAKQ9NYW8 714 aaPredicted RBP14.47□□□□□ -0.09
PRDM2-213ENST00000503842 LRRIQ3A6PVS8 624 aaPredicted RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 TIMP1P01033 207 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 TPM2P07951 284 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM49P0CI25 452 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM49CP0CI26 452 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 CXCL8P10145 99 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 ZSCAN20P17040 1043 aaPredicted RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 RFC2P35250 354 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 OSTNP61366 133 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 DLG4P78352 724 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 CLDN10P78369 228 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 KCNH2Q12809 1159 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 DCAF17Q5H9S7 520 aaPredicted RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 MRPL10Q7Z7H8 261 aaKnown RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 SEPT8Q92599 483 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 APBB2Q92870 758 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 VWCEQ96DN2 955 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 MRFAP1L1Q96HT8 127 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 ADAM2Q99965 735 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 CCDC94Q9BW85 323 aaPredicted RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 FTHL17Q9BXU8 183 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 TRIM6Q9C030 488 aaPredicted RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 NDST4Q9H3R1 872 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 RPF1Q9H9Y2 349 aaKnown RBP14.46□□□□□ -0.09
PRDM2-213ENST00000503842 FAM105AQ9NUU6 356 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 IPPQ9Y573 584 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 PCDHB2Q9Y5E7 798 aa14.46□□□□□ -0.09
PRDM2-213ENST00000503842 ANK1P16157 1881 aa14.46□□□□□ -0.1
PRDM2-213ENST00000503842 CITO14578 2027 aa14.46□□□□□ -0.1
PRDM2-213ENST00000503842 TTC26A0AVF1 554 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 TEX33O43247 280 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 ZNF623O75123 536 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 IL18RAPO95256 599 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 ADCY5O95622 1261 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 AFPP02771 609 aaKnown RBP14.45□□□□□ -0.1
PRDM2-213ENST00000503842 ITGB8P26012 769 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 PBX1P40424 430 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 RAB27AP51159 221 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 SURF1Q15526 300 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 TCTN1Q2MV58 587 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 SLC10A6Q3KNW5 377 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 TCERG1LQ5VWI1 586 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 USP37Q86T82 979 aa14.45□□□□□ -0.1
PRDM2-213ENST00000503842 RTN4RL1Q86UN2 441 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms