RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 DCLRE1AQ6PJP8 1040 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 LRRC55Q6ZSA7 311 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 GPD1LQ8N335 351 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 MICALL1Q8N3F8 863 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 LRRC52Q8N7C0 313 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 COLGALT1Q8NBJ5 622 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 KIAA0895Q8NCT3 520 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 DHTKD1Q96HY7 919 aaPredicted RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 IGSF21Q96ID5 467 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 CEP295NLQ96MC4 621 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 RPS6KC1Q96S38 1066 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 GAS2L1Q99501 681 aaPredicted RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PLIN2Q99541 437 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 MSTO1Q9BUK6 570 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 KIFC3Q9BVG8 833 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 COLEC11Q9BWP8 271 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 EIF2AQ9BY44 585 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 NXF3Q9H4D5 531 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 VRTNQ9H8Y1 702 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 AGPAT3Q9NRZ7 376 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 CHST7Q9NS84 486 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 LMBRD1Q9NUN5 540 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 SPG21Q9NZD8 308 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 KIAA1468Q9P260 1216 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 FNIP2Q9P278 1114 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PUF60Q9UHX1 559 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 AGO2Q9UKV8 859 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PLAGL2Q9UPG8 496 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 MRPL42Q9Y6G3 142 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 COL6A3P12111 3177 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SF3B1O75533 1304 aaKnown RBP eCLIP5.53□□□□□ -1.527e-9■■■■■ 132.1
HDAC6-223ENST00000480525 A0A087WWV3 80 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SMIM28A0A1B0GU29 152 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ANO9A1A5B4 782 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 BICDL2A1A5D9 508 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF233A6NK53 670 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TTLL13PA6NNM8 815 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SFI1A8K8P3 1242 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 M0QZQ0 153 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PSMA7O14818 248 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SLC16A3O15427 465 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TGFB1I1O43294 461 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CALUO43852 315 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CSDE1O75534 798 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 FGF18O76093 207 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SLC34A2O95436 690 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 NPTXRO95502 500 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 GNA14O95837 355 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SOD2P04179 222 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CTSAP10619 480 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 FGFR1P11362 822 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 FGFR4P22455 802 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ERCC5P28715 1186 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 GTF2H1P32780 548 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 HOXD13P35453 343 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PBX2P40425 430 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 MLH1P40692 756 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CASP5P51878 434 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 BCAR1P56945 870 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 RAD51AP2Q09MP3 1159 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 STK4Q13043 487 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 KCNC3Q14003 757 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 MORC3Q14149 939 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PSMD6Q15008 389 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ENOX2Q16206 610 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 UPP1Q16831 310 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SLC10A6Q3KNW5 377 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 FOXD4L5Q5VV16 416 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 EEF1DP3Q658K8 133 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ARMCX5Q6P1M9 558 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ELMSAN1Q6PJG2 1045 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CRELD2Q6UXH1 353 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 INTS8Q75QN2 995 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 MAEAQ7L5Y9 396 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 DPH6Q7L8W6 267 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 PPFIBP1Q86W92 1011 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 WDR49Q8IV35 697 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 ADSSL1Q8N142 457 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 DEFB123Q8N688 67 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 MLKLQ8NB16 471 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 XXYLT1Q8NBI6 393 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SPPL3Q8TCT6 385 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 HELQQ8TDG4 1101 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TMC2Q8TDI7 906 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CACTINQ8WUQ7 758 aaKnown RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 FOXD4L4Q8WXT5 416 aaPredicted RBP5.53□□□□□ -1.52
HDAC6-223ENST00000480525 POMGNT1Q8WZA1 660 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TAF4BQ92750 862 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 SMARCE1Q969G3 411 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 BICD1Q96G01 975 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 TMEM169Q96HH4 297 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 LRCH3Q96II8 777 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CPB2Q96IY4 423 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 MFSD14AQ96MC6 490 aa5.53□□□□□ -1.52
HDAC6-223ENST00000480525 CEP63Q96MT8 703 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms