RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KLRC2P26717 231 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 NMT1P30419 496 aaKnown RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 GRM5P41594 1212 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 YARSP54577 528 aaKnown RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 NCKAP1LP55160 1127 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ZP2Q05996 745 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 TUSC3Q13454 348 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 HSP90AA2PQ14568 343 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 NAB2Q15742 525 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ZC2HC1CQ53FD0 456 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 FUT10Q6P4F1 479 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SYCE2Q6PIF2 218 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 MPZL3Q6UWV2 235 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 TMEM184AQ6ZMB5 413 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SV2BQ7L1I2 683 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 APBB1IPQ7Z5R6 666 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SMRP1Q8NCR6 262 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 STAMQ92783 540 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 CASP10Q92851 521 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 BICD1Q96G01 975 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ACAP3Q96P50 834 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ANP32EQ9BTT0 268 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 HERC2P3Q9BVR0 1158 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 CCDC94Q9BW85 323 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 EMILIN2Q9BXX0 1053 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 HAPLN2Q9GZV7 340 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 SCAND2PQ9GZW5 306 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 S1PR5Q9H228 398 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 EPHX3Q9H6B9 360 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 PARVGQ9HBI0 331 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 GOLGA2P5Q9HBQ8 144 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 MRPL17Q9NRX2 175 aaKnown RBP9.06□□□□□ -0.96
HDAC6-221ENST00000477561 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 ADAM28Q9UKQ2 775 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 IRAK3Q9Y616 596 aa9.06□□□□□ -0.96
HDAC6-221ENST00000477561 BDP1A6H8Y1 2624 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 ZMYM2Q9UBW7 1377 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SMIM28A0A1B0GU29 152 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 FSD2A1L4K1 749 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 MYMKA6NI61 221 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 CLDN3O15551 220 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 MEFVO15553 781 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 TOM1L1O75674 476 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 KIF4AO95239 1232 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 EFEMP2O95967 443 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SPATA31D3P0C874 917 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 RPL17P18621 184 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SP100P23497 879 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 STAT6P42226 847 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 GLUD2P49448 558 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 CLCNKBP51801 687 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 ZNF131P52739 623 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 DNM1Q05193 864 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SPAG1Q07617 926 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 USP41Q3LFD5 358 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 RARS2Q5T160 578 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 KIAA0319Q5VV43 1072 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 PRSS55Q6UWB4 352 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 CCDC73Q6ZRK6 1079 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SPATA31D4Q6ZUB0 917 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SFR1Q86XK3 245 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 CEP57Q86XR8 500 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 ADHFE1Q8IWW8 467 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 RNF168Q8IYW5 571 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 TMEM130Q8N3G9 435 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 FEZF2Q8TBJ5 459 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 SLC22A17Q8WUG5 538 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 RIN2Q8WYP3 895 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 DDX12PQ92771 950 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 CHAMP1Q96JM3 812 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 RPGRIP1Q96KN7 1286 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 ZMAT2Q96NC0 199 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 TBC1D7Q9P0N9 293 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 TBX20Q9UMR3 447 aa9.05□□□□□ -0.96
HDAC6-221ENST00000477561 TDRD15B5MCY1 1934 aaKnown RBP9.05□□□□□ -0.96
HDAC6-221ENST00000477561 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TISP43B9A030 160 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 ANKRD63C9JTQ0 380 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 H0YCG3 227 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 I3L4J1 428 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 HNRNPDLO14979 420 aaKnown RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TEX28O15482 410 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 PPP6R2O75170 966 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 PRPF40AO75400 957 aaKnown RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 MBD3O95983 291 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 IDEP14735 1019 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 HOXB8P17481 243 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TNFSF9P41273 254 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 LIG4P49917 911 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 CLCN4P51793 760 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 DSG1Q02413 1049 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SOX4Q06945 474 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 MCL1Q07820 350 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 NOLC1Q14978 699 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC6-221ENST00000477561 SLC10A6Q3KNW5 377 aa9.04□□□□□ -0.96
HDAC6-221ENST00000477561 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms