RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 PALB2Q86YC2 1186 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 SPEM1Q8N4L4 309 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 DAGLBQ8NCG7 672 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 DEPDC1BQ8WUY9 529 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
SF3A3-205ENST00000470585 IRF7Q92985 503 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 E2F7Q96AV8 911 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 CHAMP1Q96JM3 812 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 PRIMPOLQ96LW4 560 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 GAD1Q99259 594 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 CLSTN3Q9BQT9 956 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 GPR62Q9BZJ7 368 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 TRIM6Q9C030 488 aaPredicted RBP7.57□□□□□ -1.2
SF3A3-205ENST00000470585 SEMA4GQ9NTN9 838 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 BACE2Q9Y5Z0 518 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 NOTCH4Q99466 2003 aa7.57□□□□□ -1.2
SF3A3-205ENST00000470585 KLF18A0A0U1RQI7 1052 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 ARHGEF37A1IGU5 675 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 TRAPPC3O43617 180 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 CHMP2AO43633 222 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 TSPAN1O60635 241 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 LRRN2O75325 713 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 AKAP3O75969 853 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 PROS1P07225 676 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 IFNAR1P17181 557 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 CDC27P30260 824 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 CXCL12P48061 93 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 SCNN1GP51170 649 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 LRRC32Q14392 662 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 PSMD5Q16401 504 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 LONRF3Q496Y0 759 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 AXDND1Q5T1B0 1012 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-205ENST00000470585 IL31Q6EBC2 164 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 PPP4R3AQ6IN85 833 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 SYNPOQ8N3V7 929 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 GSTCDQ8NEC7 633 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 LNX1Q8TBB1 728 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-205ENST00000470585 CEP170P1Q96L14 293 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 ESYT1Q9BSJ8 1104 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 RPP25Q9BUL9 199 aaKnown RBP7.56□□□□□ -1.2
SF3A3-205ENST00000470585 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 MINDY3Q9H8M7 445 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 TRPV4Q9HBA0 871 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 MTRRQ9UBK8 725 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 MRPS23Q9Y3D9 190 aaKnown RBP7.56□□□□□ -1.2
SF3A3-205ENST00000470585 MTF2Q9Y483 593 aaPredicted RBP7.56□□□□□ -1.2
SF3A3-205ENST00000470585 PCDHGA5Q9Y5G8 931 aa7.56□□□□□ -1.2
SF3A3-205ENST00000470585 ZZEF1O43149 2961 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 TM4SF5O14894 197 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 EDIL3O43854 480 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 DGAT1O75907 488 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 LYPLA2O95372 231 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SPATA31D3P0C874 917 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SRGAP2CP0DJJ0 459 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 FGFR3P22607 806 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 YWHABP31946 246 aaKnown RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 EVCP57679 992 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SPEM2Q0P670 501 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SIM2Q14190 667 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 GSE1Q14687 1217 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 EMC2Q15006 297 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ACAP1Q15027 740 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 EPHA7Q15375 998 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 AMHR2Q16671 573 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 FAM187BQ17R55 369 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SPATA31D4Q6ZUB0 917 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ANKS3Q6ZW76 656 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 MAP4K3Q8IVH8 894 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ITFG1Q8TB96 612 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SLC7A14Q8TBB6 771 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 TBCKQ8TEA7 893 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 UROC1Q96N76 676 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 MTRQ99707 1265 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 TRMT61BQ9BVS5 477 aaKnown RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 LRRC2Q9BYS8 371 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 AGXT2Q9BYV1 514 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 C8orf33Q9H7E9 229 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ZSWIM4Q9H7M6 989 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 BRD9Q9H8M2 597 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 ZFP14Q9HCL3 533 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 KCNMB3Q9NPA1 279 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SDK1Q7Z5N4 2213 aa7.55□□□□□ -1.2
SF3A3-205ENST00000470585 SHISA7A6NL88 538 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 M0R2N6 131 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 THP07101 528 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 RHOP08100 348 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 ZNF806P0C7X5 589 aa7.54□□□□□ -1.2
SF3A3-205ENST00000470585 XRCC6P12956 609 aaKnown RBP eCLIP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
SF3A3-205ENST00000470585 PTPN2P17706 415 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms