RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SCN9AQ15858 1988 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 NOL4O94818 638 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 TMOD1P28289 359 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 AGBL3Q8NEM8 1001 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 OR2W6PQ8NHA6 318 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 BAP1Q92560 729 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 SLC5A4Q9NY91 659 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 UBAP1Q9NZ09 502 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 HSPBP1Q9NZL4 362 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 NXF1Q9UBU9 619 aaKnown RBP13.17□□□□□ -0.3
USP11-206ENST00000469080 AMACRQ9UHK6 382 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
USP11-206ENST00000469080 ANKRD63C9JTQ0 380 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CD19P15391 556 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 HOXD13P35453 343 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 VAMP7P51809 220 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CEP63Q96MT8 703 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 HSD17B14Q9BPX1 270 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■□□□□ 10.8
USP11-206ENST00000469080 SNX12Q9UMY4 172 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 STK38LQ9Y2H1 464 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CNTNAP1P78357 1384 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 WDR64B1ANS9 1081 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 VWA5AO00534 786 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 PDXKO00764 312 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 RARRES1P49788 294 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 BACE1P56817 501 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 DEUP1Q05D60 604 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 PGM5Q15124 567 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 KAZNQ674X7 775 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 C1orf186Q6ZWK4 172 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 ZFAND2BQ8WV99 257 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 FGD4Q96M96 766 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 SLX1AQ9BQ83 275 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 HEMGNQ9BXL5 484 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 WDR35Q9P2L0 1181 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 USH1CQ9Y6N9 552 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 WDR46O15213 610 aaKnown RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 E2F6O75461 281 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 SUPT3HO75486 399 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 STRN3Q13033 797 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 CFAP58Q5T655 872 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 RNF220Q5VTB9 566 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 XXYLT1Q8NBI6 393 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 ABTB1Q969K4 478 aaPredicted RBP13.16□□□□□ -0.3
USP11-206ENST00000469080 OPTNQ96CV9 577 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 APOL6Q9BWW8 343 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 NAV1Q8NEY1 1877 aa13.16□□□□□ -0.3
USP11-206ENST00000469080 GJB6O95452 261 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 FGGP02679 453 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 FTLP02792 175 aaPredicted RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 FAM200BP0CF97 657 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 MDH1P40925 334 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 ANKRD20A2Q5SQ80 823 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 ANKRD20A1Q5TYW2 823 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 ANKRD20A3Q5VUR7 823 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 PRCCQ92733 491 aaPredicted RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 CD2APQ9Y5K6 639 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 ITGA4P13612 1032 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 GAP43P17677 238 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 TUBP50607 506 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 PPP3CAQ08209 521 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 TMEM154Q6P9G4 183 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 C6orf89Q6UWU4 347 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 ARHGEF19Q8IW93 802 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 COPS5Q92905 334 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 NAF1Q96HR8 494 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 TARS2Q9BW92 718 aaKnown RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 THAP2Q9H0W7 228 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 POLR3FQ9H1D9 316 aaPredicted RBP13.15□□□□□ -0.3
USP11-206ENST00000469080 R3HDMLQ9H3Y0 253 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 LY75O60449 1722 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 CCNE2O96020 404 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 CCND2P30279 289 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
USP11-206ENST00000469080 PRKCEQ02156 737 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms