RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SP100P23497 879 aaPredicted RBP20.75■□□□□ 0.91
COL5A1-203ENST00000460264 STRN3Q13033 797 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 MPZL3Q6UWV2 235 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 TMC5Q6UXY8 1006 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 ZBTB33Q86T24 672 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 RIN2Q8WYP3 895 aaPredicted RBP20.75■□□□□ 0.91
COL5A1-203ENST00000460264 CCDC94Q9BW85 323 aaPredicted RBP20.75■□□□□ 0.91
COL5A1-203ENST00000460264 CCSER1Q9C0I3 900 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 TOPORSQ9NS56 1045 aaPredicted RBP20.75■□□□□ 0.91
COL5A1-203ENST00000460264 LARSQ9P2J5 1176 aaKnown RBP20.75■□□□□ 0.91
COL5A1-203ENST00000460264 GLUD1P00367 558 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 MARCKSP29966 332 aaPredicted RBP20.74■□□□□ 0.91
COL5A1-203ENST00000460264 YARSP54577 528 aaKnown RBP20.74■□□□□ 0.91
COL5A1-203ENST00000460264 NCKAP1LP55160 1127 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 DHX8Q14562 1220 aaKnown RBP20.74■□□□□ 0.91
COL5A1-203ENST00000460264 MCM6Q14566 821 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 RASSF8Q8NHQ8 419 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 RAD54LQ92698 747 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 MAN1C1Q9NR34 630 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.74■□□□□ 0.91
COL5A1-203ENST00000460264 FBXO2Q9UK22 296 aaPredicted RBP20.74■□□□□ 0.91
COL5A1-203ENST00000460264 NR2E1Q9Y466 385 aa20.74■□□□□ 0.91
COL5A1-203ENST00000460264 SPDYE4A6NLX3 237 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 TOM1L1O75674 476 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 OSTNP61366 133 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 CREMQ03060 361 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 XKR4Q5GH76 650 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 RTP2Q5QGT7 225 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 ATAT1Q5SQI0 421 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 ALKAL1Q6UXT8 129 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 USP49Q70CQ1 688 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 GPR149Q86SP6 731 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 EDAQ92838 391 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 EPSTI1Q96J88 318 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 SNX27Q96L92 541 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 FNIP2Q9P278 1114 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 ANKFY1Q9P2R3 1169 aa20.73■□□□□ 0.91
COL5A1-203ENST00000460264 SMIM28A0A1B0GU29 152 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 H0YCG3 227 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 TMEM189-UBE2V1I3L0A0 370 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 STX6O43752 255 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 HARSP12081 509 aaKnown RBP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 ZNF131P52739 623 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 NOLC1Q14978 699 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 SPECC1Q5M775 1068 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 FAM171A1Q5VUB5 890 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 ZPBP2Q6X784 338 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 LARP4BQ92615 738 aaKnown RBP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 KCNN1Q92952 543 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 SNX21Q969T3 373 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 ZBTB45Q96K62 511 aaPredicted RBP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 TTPALQ9BTX7 342 aa20.72■□□□□ 0.91
COL5A1-203ENST00000460264 SRPRBQ9Y5M8 271 aaKnown RBP20.72■□□□□ 0.91
COL5A1-203ENST00000460264 C2CD4DB7Z1M9 353 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 FAM13AO94988 1023 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 RPL17P18621 184 aaKnown RBP20.71■□□□□ 0.91
COL5A1-203ENST00000460264 CLCNKBP51801 687 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 CEBPZQ03701 1054 aaKnown RBP20.71■□□□□ 0.91
COL5A1-203ENST00000460264 SOX4Q06945 474 aaPredicted RBP20.71■□□□□ 0.91
COL5A1-203ENST00000460264 ELAVL2Q12926 359 aaKnown RBP20.71■□□□□ 0.91
COL5A1-203ENST00000460264 C15orf39Q6ZRI6 1047 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 HAUS6Q7Z4H7 955 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 PALB2Q86YC2 1186 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 CMASQ8NFW8 434 aaPredicted RBP20.71■□□□□ 0.91
COL5A1-203ENST00000460264 PIK3R5Q8WYR1 880 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 UROC1Q96N76 676 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 ACAP3Q96P50 834 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 PARVGQ9HBI0 331 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 GOLGA2P5Q9HBQ8 144 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 DPP7Q9UHL4 492 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 MYO10Q9HD67 2058 aa20.71■□□□□ 0.91
COL5A1-203ENST00000460264 MEFVO15553 781 aaPredicted RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 TGM5O43548 720 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 B3GAT3O94766 335 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 C1RP00736 705 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 KCNE1P15382 129 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 IGFBP6P24592 240 aaPredicted RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 ZXDAP98168 799 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 MCL1Q07820 350 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 PTPN21Q16825 1174 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 UPP1Q16831 310 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 ELMSAN1Q6PJG2 1045 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 CEP57Q86XR8 500 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 GLYCTKQ8IVS8 523 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 TDRD5Q8NAT2 981 aaKnown RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 ZMAT2Q96NC0 199 aaKnown RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 CLIC6Q96NY7 704 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 ZSCAN16Q9H4T2 348 aaPredicted RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 SLC38A7Q9NVC3 462 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 CNTN3Q9P232 1028 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 STK17AQ9UEE5 414 aa20.7■□□□□ 0.9
COL5A1-203ENST00000460264 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
COL5A1-203ENST00000460264 ZNF318Q5VUA4 2279 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 K7ENM7 598 aa20.69■□□□□ 0.9
COL5A1-203ENST00000460264 TBCAO75347 108 aaKnown RBP20.69■□□□□ 0.9
COL5A1-203ENST00000460264 KRT18P05783 430 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms