RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 KCNH3Q9ULD8 1083 aa19.11■□□□□ 0.65
UBE2D4-209ENST00000454428 WDFY3Q8IZQ1 3526 aa19.11■□□□□ 0.65
UBE2D4-209ENST00000454428 A0A1B0GUA9 196 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 CASTOR2A6NHX0 329 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 NRG2O14511 850 aaPredicted RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 PTGESO14684 152 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 SLC30A4O14863 429 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 XYLBO75191 536 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 PDIA3P30101 505 aaKnown RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 ADCY1Q08828 1119 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 SPIRE1Q08AE8 756 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 TUSC3Q13454 348 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 MXD4Q14582 209 aaPredicted RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 EPHA7Q15375 998 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 PABPC1LQ4VXU2 614 aaKnown RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 XKR9Q5GH70 373 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 AXDND1Q5T1B0 1012 aaPredicted RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 ZNF852Q6ZMS4 543 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 CEP57Q86XR8 500 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 DYDC2Q96IM9 177 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 FAM20AQ96MK3 541 aa19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 TRIM6Q9C030 488 aaPredicted RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 CNOT1A5YKK6 2376 aaKnown RBP19.1■□□□□ 0.65
UBE2D4-209ENST00000454428 SPEGQ15772 3267 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 NCAM2O15394 837 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 FCARP24071 287 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 ARL2P36404 184 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 EVCP57679 992 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 RAB33AQ14088 237 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 CTTNQ14247 550 aaKnown RBP19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 TANGO2Q6ICL3 276 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 SLC27A1Q6PCB7 646 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 MAMSTRQ6ZN01 415 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 NETO1Q8TDF5 533 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 JAKMIP1Q96N16 626 aaKnown RBP19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 AIFM3Q96NN9 605 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 NFKBIZQ9BYH8 718 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 SLKQ9H2G2 1235 aaPredicted RBP19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 CHRDQ9H2X0 955 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 PARP2Q9UGN5 583 aa19.09■□□□□ 0.65
UBE2D4-209ENST00000454428 ZZEF1O43149 2961 aa19.08■□□□□ 0.65
UBE2D4-209ENST00000454428 BAHCC1Q9P281 2608 aa19.08■□□□□ 0.65
UBE2D4-209ENST00000454428 GLRA2P23416 452 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 CYP4A11Q02928 519 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 NCBP1Q09161 790 aaKnown RBP19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 UVSSAQ2YD98 709 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 LAIR1Q6GTX8 287 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 OTUD6AQ7L8S5 288 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 HACE1Q8IYU2 909 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 MCRS1Q96EZ8 462 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 SNX14Q9Y5W7 946 aa19.08■□□□□ 0.64
UBE2D4-209ENST00000454428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 TTLL13PA6NNM8 815 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 SLITRK3O94933 977 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 CEBPBP17676 345 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 RPS6KB1P23443 525 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 OR1D2P34982 312 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 PPP4R3AQ6IN85 833 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 DNASE1L2Q92874 299 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 ELSPBP1Q96BH3 223 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 ZSWIM4Q9H7M6 989 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 RALYQ9UKM9 306 aaKnown RBP19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 MRPS17Q9Y2R5 130 aaKnown RBP19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 MRPS23Q9Y3D9 190 aaKnown RBP19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 CEP295Q9C0D2 2601 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 LAMA1P25391 3075 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 TICRRQ7Z2Z1 1910 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 RALGAPA1Q6GYQ0 2036 aa19.07■□□□□ 0.64
UBE2D4-209ENST00000454428 GDF9O60383 454 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 RETP07949 1114 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 RHOP08100 348 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 FGFR3P22607 806 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 TFDP1Q14186 410 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 BLOC1S2Q6QNY1 142 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 CD300LGQ6UXG3 332 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 CELF5Q8N6W0 485 aaKnown RBP19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 AVENQ9NQS1 362 aaPredicted RBP19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 GDE1Q9NZC3 331 aa19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 NDRG2Q9UN36 371 aaKnown RBP19.06■□□□□ 0.64
UBE2D4-209ENST00000454428 LRP3O75074 770 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 DMWDQ09019 674 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 GAS6Q14393 721 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 GRM2Q14416 872 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 NCAPH2Q6IBW4 605 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 POTEDQ86YR6 584 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 SEMA4GQ9NTN9 838 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 MTRRQ9UBK8 725 aa19.05■□□□□ 0.64
UBE2D4-209ENST00000454428 TBX3O15119 743 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 NRLP54845 237 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 SATB1Q01826 763 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 SSRP1Q08945 709 aaKnown RBP19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 PRSS36Q5K4E3 855 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 GALNT17Q6IS24 598 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 PRR23CQ6ZRP0 262 aa19.04■□□□□ 0.64
UBE2D4-209ENST00000454428 TPH2Q8IWU9 490 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms