RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 SNX27Q96L92 541 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 PPP1R10Q96QC0 940 aaKnown RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 PAAF1Q9BRP4 392 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 ZBP1Q9H171 429 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 TOPORSQ9NS56 1045 aaPredicted RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 THEGQ9P2T0 379 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 PCDHB13Q9Y5F0 798 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 STYXL1Q9Y6J8 313 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 XIRP2A4UGR9 3374 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 SMIM28A0A1B0GU29 152 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 HIDE1A8MVS5 230 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 TNFSF9P41273 254 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 SYKP43405 635 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 TFF2Q03403 129 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 HLA-CQ95604 372 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 ZMAT2Q96NC0 199 aaKnown RBP17.17■□□□□ 0.34
ACTB-206ENST00000443528 ACCSQ96QU6 501 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
ACTB-206ENST00000443528 ENTPD7Q9NQZ7 604 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 CNTN3Q9P232 1028 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 COG5Q9UP83 839 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 MYO7AQ13402 2215 aa17.17■□□□□ 0.34
ACTB-206ENST00000443528 TDRD15B5MCY1 1934 aaKnown RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 OGTO15294 1046 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 NR1I2O75469 434 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 PRPF6O94906 941 aaKnown RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 CLTAP09496 248 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 KCNE1P15382 129 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 ADSSP30520 456 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 NRIP1P48552 1158 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 SOX4Q06945 474 aaPredicted RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 ALCAMQ13740 583 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 CTC1Q2NKJ3 1217 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 TAS1R1Q7RTX1 841 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 RBM23Q86U06 439 aaKnown RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 MRPL43Q8N983 215 aaKnown RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 MSTO1Q9BUK6 570 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 IGFLR1Q9H665 355 aa17.16■□□□□ 0.34
ACTB-206ENST00000443528 UBE2ZQ9H832 354 aaPredicted RBP17.16■□□□□ 0.34
ACTB-206ENST00000443528 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 C2orf71A6NGG8 1288 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 PER2O15055 1255 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 LINC01565O15544 149 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 KLRC4O43908 158 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 CXCL14O95715 111 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 CXCL8P10145 99 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 CTSAP10619 480 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 IGFBP6P24592 240 aaPredicted RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 ADAM15Q13444 863 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 EPM2AIP1Q7L775 607 aaPredicted RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 AUTS2Q8WXX7 1259 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 TLE6Q9H808 572 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 GOLGA2P5Q9HBQ8 144 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 CPSF3Q9UKF6 684 aaKnown RBP17.15■□□□□ 0.34
ACTB-206ENST00000443528 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 EXOC7Q9UPT5 735 aa17.15■□□□□ 0.34
ACTB-206ENST00000443528 TTC26A0AVF1 554 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 NCK2O43639 380 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 ZNF202O95125 648 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 KIF4AO95239 1232 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 SOD2P04179 222 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 ADRB2P07550 413 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 HOXD13P35453 343 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 LTBRP36941 435 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
ACTB-206ENST00000443528 KYAT1Q16773 422 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 DUSP6Q16828 381 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 EFHBQ8N7U6 833 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 C18orf25Q96B23 403 aaPredicted RBP17.14■□□□□ 0.33
ACTB-206ENST00000443528 GPR62Q9BZJ7 368 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 PLEKHA5Q9HAU0 1116 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 STK39Q9UEW8 545 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 IRAK3Q9Y616 596 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 A0A0C4DFX4 3053 aa17.14■□□□□ 0.33
ACTB-206ENST00000443528 LACTBL1A8MY62 500 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 EIF3DO15371 548 aaKnown RBP eCLIP17.13■□□□□ 0.33
ACTB-206ENST00000443528 LILRB3O75022 631 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 GLP2RO95838 553 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 ACOT2P49753 483 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 CLCNKBP51801 687 aa17.13■□□□□ 0.33
ACTB-206ENST00000443528 MRPS5P82675 430 aaKnown RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 RBM10P98175 930 aaKnown RBP17.13■□□□□ 0.33
ACTB-206ENST00000443528 DLX2Q07687 328 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms