RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RIN2Q8WYP3 895 aaPredicted RBP19.27■□□□□ 0.68
NUP50-208ENST00000430547 LARP4BQ92615 738 aaKnown RBP19.27■□□□□ 0.68
NUP50-208ENST00000430547 RAD54LQ92698 747 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 SNX21Q969T3 373 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 BICD1Q96G01 975 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 B3GALT6Q96L58 329 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 PAAF1Q9BRP4 392 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 LRFN3Q9BTN0 628 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 GPR62Q9BZJ7 368 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 CCSER1Q9C0I3 900 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 ZHX3Q9H4I2 956 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 TSHZ2Q9NRE2 1034 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 MTMR6Q9Y217 621 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 TEX28O15482 410 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 TOM1L1O75674 476 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 KIF4AO95239 1232 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 EFEMP2O95967 443 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 GLUD1P00367 558 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 MAPTP10636 758 aaKnown RBP19.26■□□□□ 0.67
NUP50-208ENST00000430547 SP100P23497 879 aaPredicted RBP19.26■□□□□ 0.67
NUP50-208ENST00000430547 ELAVL2Q12926 359 aaKnown RBP19.26■□□□□ 0.67
NUP50-208ENST00000430547 NOLC1Q14978 699 aaKnown RBP eCLIP19.26■□□□□ 0.67
NUP50-208ENST00000430547 ARSHQ5FYA8 562 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 TMC5Q6UXY8 1006 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 MYCT1Q8N699 235 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 ACAP3Q96P50 834 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 PARVGQ9HBI0 331 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 PTPRHQ9HD43 1115 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 CHST7Q9NS84 486 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 BLOC1S4Q9NUP1 217 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 SRPRBQ9Y5M8 271 aaKnown RBP19.26■□□□□ 0.67
NUP50-208ENST00000430547 DENND4AQ7Z401 1863 aa19.26■□□□□ 0.67
NUP50-208ENST00000430547 VWA8A3KMH1 1905 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 K7ENM7 598 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 WEE2P0C1S8 567 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 SCP2P22307 547 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 NCKAP1LP55160 1127 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 NAB2Q15742 525 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 HERC4Q5GLZ8 1057 aaPredicted RBP19.25■□□□□ 0.67
NUP50-208ENST00000430547 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 ZPBP2Q6X784 338 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 HAUS6Q7Z4H7 955 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 GPR65Q8IYL9 337 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 EPSTI1Q96J88 318 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 UROC1Q96N76 676 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 PPP1R10Q96QC0 940 aaKnown RBP19.25■□□□□ 0.67
NUP50-208ENST00000430547 CXCL16Q9H2A7 254 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 POMKQ9H5K3 350 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 RXFP1Q9HBX9 757 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 MAN1C1Q9NR34 630 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 SLC38A7Q9NVC3 462 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 CDH22Q9UJ99 828 aa19.25■□□□□ 0.67
NUP50-208ENST00000430547 FBXO2Q9UK22 296 aaPredicted RBP19.25■□□□□ 0.67
NUP50-208ENST00000430547 PRR33A8MZF0 331 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 CLDN3O15551 220 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 PROZP22891 400 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 FAM171A1Q5VUB5 890 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 GLYCTKQ8IVS8 523 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 KRI1Q8N9T8 703 aaKnown RBP19.24■□□□□ 0.67
NUP50-208ENST00000430547 TTPALQ9BTX7 342 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 C11orf16Q9NQ32 467 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 STK17AQ9UEE5 414 aa19.24■□□□□ 0.67
NUP50-208ENST00000430547 SMIM28A0A1B0GU29 152 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 HNRNPDLO14979 420 aaKnown RBP19.23■□□□□ 0.67
NUP50-208ENST00000430547 TRAK2O60296 914 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 B3GAT3O94766 335 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 BRD1O95696 1058 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 ABCD1P33897 745 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 DDIT3P35638 169 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 LIG4P49917 911 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 RRAGBQ5VZM2 374 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 KANK3Q6NY19 840 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 PDXDC1Q6P996 788 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 PALB2Q86YC2 1186 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 LRRC15Q8TF66 581 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 ZBTB45Q96K62 511 aaPredicted RBP19.23■□□□□ 0.67
NUP50-208ENST00000430547 SNX27Q96L92 541 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 CLIC6Q96NY7 704 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 USP28Q96RU2 1077 aa19.23■□□□□ 0.67
NUP50-208ENST00000430547 TMEM189-UBE2V1I3L0A0 370 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 ABLIM1O14639 778 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 TRAPPC3O43617 180 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 CLCNKBP51801 687 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 ZNF131P52739 623 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 SLC39A14Q15043 492 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 STK38Q15208 465 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 PSMD5Q16401 504 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 RTP2Q5QGT7 225 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 DCLRE1AQ6PJP8 1040 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 PRSS55Q6UWB4 352 aaPredicted RBP19.22■□□□□ 0.67
NUP50-208ENST00000430547 C15orf39Q6ZRI6 1047 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 USP49Q70CQ1 688 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 GPR149Q86SP6 731 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 TDRD5Q8NAT2 981 aaKnown RBP19.22■□□□□ 0.67
NUP50-208ENST00000430547 ZNF396Q96N95 335 aaPredicted RBP19.22■□□□□ 0.67
NUP50-208ENST00000430547 GOLGA2P5Q9HBQ8 144 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 TBX20Q9UMR3 447 aa19.22■□□□□ 0.67
NUP50-208ENST00000430547 HCN4Q9Y3Q4 1203 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms