RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 KCNK12Q9HB15 430 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 KMT5AQ9NQR1 393 aa13.22□□□□□ -0.29
TTC3-208ENST00000428693 CLUHO75153 1309 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 VWA3AA6NCI4 1184 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 SFI1A8K8P3 1242 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 H0Y858 1186 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 LAD1O00515 517 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 SLC16A4O15374 487 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 B3GAT3O94766 335 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.29
TTC3-208ENST00000428693 NPTX2P47972 431 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 TDGQ13569 410 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 IGSF22Q8N9C0 903 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 CCDC94Q9BW85 323 aaPredicted RBP13.21□□□□□ -0.29
TTC3-208ENST00000428693 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.29
TTC3-208ENST00000428693 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
TTC3-208ENST00000428693 FNIP2Q9P278 1114 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
TTC3-208ENST00000428693 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 CFHP08603 1231 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 CLCNKBP51801 687 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 TCF15Q12870 199 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
TTC3-208ENST00000428693 STRN3Q13033 797 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 IL17AQ16552 155 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 PPM1LQ5SGD2 360 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 RINT1Q6NUQ1 792 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 CMASQ8NFW8 434 aaPredicted RBP13.2□□□□□ -0.3
TTC3-208ENST00000428693 RASSF8Q8NHQ8 419 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
TTC3-208ENST00000428693 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
TTC3-208ENST00000428693 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
TTC3-208ENST00000428693 PHLPP2Q6ZVD8 1323 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 I3L4J1 428 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 CCL16O15467 120 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 NARSO43776 548 aaKnown RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 N4BP1O75113 896 aaKnown RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 EFEMP2O95967 443 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 PRPHP41219 470 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 SMTNP53814 917 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 ASTLQ6HA08 431 aaPredicted RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 KCNK18Q7Z418 384 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 SIX5Q8N196 739 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 CEP120Q8N960 986 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 ZNF707Q96C28 371 aaPredicted RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 MYADMQ96S97 322 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 ACO2Q99798 780 aaKnown RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
TTC3-208ENST00000428693 PRKD2Q9BZL6 878 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 CDT1Q9H211 546 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 ZDHHC7Q9NXF8 308 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 IGSF9Q9P2J2 1179 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 TNFSF13BQ9Y275 285 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 KMT2EQ8IZD2 1858 aa13.19□□□□□ -0.3
TTC3-208ENST00000428693 MTCL1Q9Y4B5 1905 aaKnown RBP13.18□□□□□ -0.3
TTC3-208ENST00000428693 SMIM28A0A1B0GU29 152 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
TTC3-208ENST00000428693 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 ZMYND10O75800 440 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 C8AP07357 584 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 FSHRP23945 695 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 OR1D2P34982 312 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 ARPP19P56211 112 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 NTHL1P78549 312 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 PDXDC1Q6P996 788 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 LILRA6Q6PI73 481 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
TTC3-208ENST00000428693 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 DAW1Q8N136 415 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 BICD1Q96G01 975 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 MMTAG2Q9BU76 263 aaKnown RBP13.18□□□□□ -0.3
TTC3-208ENST00000428693 CA14Q9ULX7 337 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 RBM19Q9Y4C8 960 aaKnown RBP13.18□□□□□ -0.3
TTC3-208ENST00000428693 NUB1Q9Y5A7 615 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 CDY1Q9Y6F8 540 aa13.18□□□□□ -0.3
TTC3-208ENST00000428693 NPHP3-ACAD11A0A0J9YXS1 232 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 ADAM12O43184 909 aa13.17□□□□□ -0.3
TTC3-208ENST00000428693 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
TTC3-208ENST00000428693 XYLBO75191 536 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms