RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 GLYCTKQ8IVS8 523 aa20.27■□□□□ 0.84
NUP50-207ENST00000424634 TMEM161BQ8NDZ6 487 aa20.27■□□□□ 0.84
NUP50-207ENST00000424634 SPIRE2Q8WWL2 714 aa20.27■□□□□ 0.84
NUP50-207ENST00000424634 CDK5RAP3Q96JB5 506 aa20.27■□□□□ 0.84
NUP50-207ENST00000424634 AK8Q96MA6 479 aa20.27■□□□□ 0.84
NUP50-207ENST00000424634 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
NUP50-207ENST00000424634 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.832e-7■■■■■ 41.4
NUP50-207ENST00000424634 SMIM28A0A1B0GU29 152 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 CCDC195A0A1B0GUA6 201 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 SPDYE4A6NLX3 237 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 MEFVO15553 781 aaPredicted RBP20.26■□□□□ 0.83
NUP50-207ENST00000424634 TGM5O43548 720 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 RFPL2O75678 378 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 CACNB1Q02641 598 aaPredicted RBP20.26■□□□□ 0.83
NUP50-207ENST00000424634 ZNF568Q3ZCX4 644 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 XKR4Q5GH76 650 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 FAM171A1Q5VUB5 890 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 C15orf39Q6ZRI6 1047 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 CMASQ8NFW8 434 aaPredicted RBP20.26■□□□□ 0.83
NUP50-207ENST00000424634 LNX1Q8TBB1 728 aaPredicted RBP20.26■□□□□ 0.83
NUP50-207ENST00000424634 FAM122AQ96E09 287 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 ASIC4Q96FT7 647 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.26■□□□□ 0.83
NUP50-207ENST00000424634 BLOC1S4Q9NUP1 217 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 LIMD1Q9UGP4 676 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 USTQ9Y2C2 406 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 CITO14578 2027 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 ZDBF2Q9HCK1 2354 aa20.26■□□□□ 0.83
NUP50-207ENST00000424634 VPS37CA5D8V6 355 aaPredicted RBP20.25■□□□□ 0.83
NUP50-207ENST00000424634 BRD1O95696 1058 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 ASGR2P07307 311 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 MAPTP10636 758 aaKnown RBP20.25■□□□□ 0.83
NUP50-207ENST00000424634 UBA7P41226 1012 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 CLCNKBP51801 687 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 SIGLEC14Q08ET2 396 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 APBB1IPQ7Z5R6 666 aaPredicted RBP20.25■□□□□ 0.83
NUP50-207ENST00000424634 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 KREMEN2Q8NCW0 462 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 PBXIP1Q96AQ6 731 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 ZMAT2Q96NC0 199 aaKnown RBP20.25■□□□□ 0.83
NUP50-207ENST00000424634 CLSTN3Q9BQT9 956 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 TTPALQ9BTX7 342 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 SMOC2Q9H3U7 446 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 GOLGA2P5Q9HBQ8 144 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 KCND2Q9NZV8 630 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 CLIC4Q9Y696 253 aa20.25■□□□□ 0.83
NUP50-207ENST00000424634 SLC26A4O43511 780 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 PAPLNO95428 1278 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 BMP15O95972 392 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 C1RP00736 705 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 MCF2P10911 925 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 SOX4Q06945 474 aaPredicted RBP20.24■□□□□ 0.83
NUP50-207ENST00000424634 UPP1Q16831 310 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 MPZL3Q6UWV2 235 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 TDRD5Q8NAT2 981 aaKnown RBP20.24■□□□□ 0.83
NUP50-207ENST00000424634 HDAC7Q8WUI4 952 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 PIK3R5Q8WYR1 880 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 ZNF707Q96C28 371 aaPredicted RBP20.24■□□□□ 0.83
NUP50-207ENST00000424634 MFSD14AQ96MC6 490 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 TCHPQ9BT92 498 aa20.24■□□□□ 0.83
NUP50-207ENST00000424634 CCDC94Q9BW85 323 aaPredicted RBP20.24■□□□□ 0.83
NUP50-207ENST00000424634 TMEM189-UBE2V1I3L0A0 370 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 ADAM12O43184 909 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 SYT1P21579 422 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 LONP1P36776 959 aaKnown RBP20.23■□□□□ 0.83
NUP50-207ENST00000424634 SMTNP53814 917 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 DHX8Q14562 1220 aaKnown RBP20.23■□□□□ 0.83
NUP50-207ENST00000424634 KARSQ15046 597 aaKnown RBP20.23■□□□□ 0.83
NUP50-207ENST00000424634 PTPAQ15257 358 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 FAM173BQ6P4H8 233 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 DCLRE1AQ6PJP8 1040 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 CCDC149Q6ZUS6 474 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 C3orf58Q8NDZ4 430 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 CALML4Q96GE6 196 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 ACAP3Q96P50 834 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 REEP2Q9BRK0 252 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 RHOBTB2Q9BYZ6 727 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 HAPLN2Q9GZV7 340 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 PLEKHA4Q9H4M7 779 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 DPP7Q9UHL4 492 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 SORCS3Q9UPU3 1222 aa20.23■□□□□ 0.83
NUP50-207ENST00000424634 N4BP1O75113 896 aaKnown RBP20.22■□□□□ 0.83
NUP50-207ENST00000424634 TOM1L1O75674 476 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 B3GAT3O94766 335 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 HARSP12081 509 aaKnown RBP20.22■□□□□ 0.83
NUP50-207ENST00000424634 PLCG1P19174 1290 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 PDCP20941 246 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 FGFR3P22607 806 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 YARSP54577 528 aaKnown RBP20.22■□□□□ 0.83
NUP50-207ENST00000424634 NCKAP1LP55160 1127 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 STRN3Q13033 797 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 RESTQ13127 1097 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 MCM6Q14566 821 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 PSMD5Q16401 504 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 SEZ6Q53EL9 994 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 USP49Q70CQ1 688 aa20.22■□□□□ 0.83
NUP50-207ENST00000424634 GPBP1Q86WP2 473 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms