RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 CEP120Q8N960 986 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
NUP50-204ENST00000417702 LRRC15Q8TF66 581 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 BICD1Q96G01 975 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
NUP50-204ENST00000417702 CLIC6Q96NY7 704 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 NECTIN4Q96NY8 510 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 GPR62Q9BZJ7 368 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP50-204ENST00000417702 ANKFY1Q9P2R3 1169 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
NUP50-204ENST00000417702 K7ENM7 598 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 CLDN3O15551 220 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 DCXO43602 365 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 MTHFRP42898 656 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 MATR3P43243 847 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP50-204ENST00000417702 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
NUP50-204ENST00000417702 CLCN4P51793 760 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 ZNF131P52739 623 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 CREMQ03060 361 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 ELAVL2Q12926 359 aaKnown RBP16.77■□□□□ 0.28
NUP50-204ENST00000417702 NOLC1Q14978 699 aaKnown RBP eCLIP16.77■□□□□ 0.28
NUP50-204ENST00000417702 RARS2Q5T160 578 aaKnown RBP16.77■□□□□ 0.28
NUP50-204ENST00000417702 HASPINQ8TF76 798 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
NUP50-204ENST00000417702 RPGRIP1Q96KN7 1286 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 UROC1Q96N76 676 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 PAAF1Q9BRP4 392 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 RXFP1Q9HBX9 757 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 DPP7Q9UHL4 492 aa16.77■□□□□ 0.28
NUP50-204ENST00000417702 SMIM28A0A1B0GU29 152 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 LOC730098B7Z3J9 87 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 ABLIM1O14639 778 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 TEX28O15482 410 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 TRAK2O60296 914 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 KIF4AO95239 1232 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 GLUD1P00367 558 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 ABCD1P33897 745 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 NAB2Q15742 525 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 TMEM31Q5JXX7 168 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 ATAT1Q5SQI0 421 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 CCDC73Q6ZRK6 1079 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 RNF135Q8IUD6 432 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 C12orf76Q8N812 135 aaPredicted RBP16.76■□□□□ 0.27
NUP50-204ENST00000417702 KCNN1Q92952 543 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 ZBTB45Q96K62 511 aaPredicted RBP16.76■□□□□ 0.27
NUP50-204ENST00000417702 B3GALT6Q96L58 329 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 PPP1R10Q96QC0 940 aaKnown RBP16.76■□□□□ 0.27
NUP50-204ENST00000417702 SFXN1Q9H9B4 322 aa16.76■□□□□ 0.27
NUP50-204ENST00000417702 B3GAT3O94766 335 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 LIG4P49917 911 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 MCL1Q07820 350 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 XKR4Q5GH76 650 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
NUP50-204ENST00000417702 DCLRE1AQ6PJP8 1040 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 ALKAL1Q6UXT8 129 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 SV2BQ7L1I2 683 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 CEP57Q86XR8 500 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 LINC00301Q8NCQ3 95 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
NUP50-204ENST00000417702 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
NUP50-204ENST00000417702 SNX27Q96L92 541 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 FNIP2Q9P278 1114 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 TBX20Q9UMR3 447 aa16.75■□□□□ 0.27
NUP50-204ENST00000417702 TMEM189-UBE2V1I3L0A0 370 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 HNRNPDLO14979 420 aaKnown RBP16.74■□□□□ 0.27
NUP50-204ENST00000417702 SPTLC2O15270 562 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 KCNE1P15382 129 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 STAT6P42226 847 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 KYAT1Q16773 422 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 DYMQ7RTS9 669 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
NUP50-204ENST00000417702 MUTYHQ9UIF7 546 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 NR2E1Q9Y466 385 aa16.74■□□□□ 0.27
NUP50-204ENST00000417702 TRAPPC3O43617 180 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 GPR37L1O60883 481 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 PPP6R2O75170 966 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 YEATS4O95619 227 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 C1RP00736 705 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 CLTAP09496 248 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 WEE2P0C1S8 567 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 ZSCAN22P10073 491 aaPredicted RBP16.73■□□□□ 0.27
NUP50-204ENST00000417702 CLCNKBP51801 687 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 UPP1Q16831 310 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
NUP50-204ENST00000417702 RTP2Q5QGT7 225 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 KANK3Q6NY19 840 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
NUP50-204ENST00000417702 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
NUP50-204ENST00000417702 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms