RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HNRNPDLO14979 420 aaKnown RBP12.26□□□□□ -0.45
RFFL-204ENST00000414419 YEATS4O95619 227 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 ADH1AP07327 375 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 PROZP22891 400 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 ZNF131P52739 623 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 ELAVL2Q12926 359 aaKnown RBP12.26□□□□□ -0.45
RFFL-204ENST00000414419 KCNC3Q14003 757 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 GLRA4Q5JXX5 417 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 FUT10Q6P4F1 479 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 ELMSAN1Q6PJG2 1045 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 TAS1R1Q7RTX1 841 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 PDILTQ8N807 584 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 CEP120Q8N960 986 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 ZBTB45Q96K62 511 aaPredicted RBP12.26□□□□□ -0.45
RFFL-204ENST00000414419 KLHL5Q96PQ7 755 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 DZANK1Q9NVP4 752 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 DPP7Q9UHL4 492 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 CFAP45Q9UL16 551 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 TBX20Q9UMR3 447 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
RFFL-204ENST00000414419 C5orf42Q9H799 3197 aa12.26□□□□□ -0.45
RFFL-204ENST00000414419 SMIM28A0A1B0GU29 152 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 CUTAO60888 179 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 BRD1O95696 1058 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 CNPP09543 421 aaKnown RBP12.25□□□□□ -0.45
RFFL-204ENST00000414419 DSG1Q02413 1049 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 CREMQ03060 361 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 ZP2Q05996 745 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 ITIH3Q06033 890 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 KYAT1Q16773 422 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 ATL3Q6DD88 541 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 SYCE2Q6PIF2 218 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 CEP57Q86XR8 500 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 KCNG4Q8TDN1 519 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 HASPINQ8TF76 798 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 RIN2Q8WYP3 895 aaPredicted RBP12.25□□□□□ -0.45
RFFL-204ENST00000414419 DDX12PQ92771 950 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 UROC1Q96N76 676 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
RFFL-204ENST00000414419 PAAF1Q9BRP4 392 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 GPR62Q9BZJ7 368 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 CXCL16Q9H2A7 254 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.25□□□□□ -0.45
RFFL-204ENST00000414419 CACNG4Q9UBN1 327 aa12.25□□□□□ -0.45
RFFL-204ENST00000414419 TRAPPC3O43617 180 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 LILRB3O75022 631 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 B3GAT3O94766 335 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 KIF4AO95239 1232 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 IDEP14735 1019 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 EPCAMP16422 314 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 GAP43P17677 238 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 NMT1P30419 496 aaKnown RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 ME1P48163 572 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 PLXNA3P51805 1871 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 GTF2BQ00403 316 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 TCHHQ07283 1943 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 MCL1Q07820 350 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 CBX2Q14781 532 aaPredicted RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 RARS2Q5T160 578 aaKnown RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 FAM171A1Q5VUB5 890 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 KIAA0319Q5VV43 1072 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 RNF168Q8IYW5 571 aaPredicted RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 SLC22A17Q8WUG5 538 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 KCNN1Q92952 543 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 DDX27Q96GQ7 796 aaKnown RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 B3GALT6Q96L58 329 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 SNX27Q96L92 541 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 TTPALQ9BTX7 342 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 S1PR5Q9H228 398 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 ADAM7Q9H2U9 754 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 MRPL44Q9H9J2 332 aaKnown RBP12.24□□□□□ -0.45
RFFL-204ENST00000414419 CD320Q9NPF0 282 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
RFFL-204ENST00000414419 MYMKA6NI61 221 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 ABLIM1O14639 778 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 TEX28O15482 410 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 EFEMP2O95967 443 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 GLUD1P00367 558 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 CLTAP09496 248 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 ALADP13716 330 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 KCNE1P15382 129 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 MTHFRP42898 656 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 CLCN4P51793 760 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 CLCNKBP51801 687 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 AMPD3Q01432 767 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 PKP1Q13835 747 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 BECN1Q14457 450 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 NAB2Q15742 525 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 SEZ6Q53EL9 994 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 XKR4Q5GH76 650 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 HERC4Q5GLZ8 1057 aaPredicted RBP12.23□□□□□ -0.45
RFFL-204ENST00000414419 ATAT1Q5SQI0 421 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 SLFN12LQ6IEE8 588 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
RFFL-204ENST00000414419 SFR1Q86XK3 245 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms