RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 POGZQ7Z3K3 1410 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 SCAPERQ9BY12 1400 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 PRKD3O94806 890 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 PCDH8O95206 1070 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 GYPEP15421 78 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 CDK11BP21127 795 aaKnown RBP5.84□□□□□ -1.47
CLK1-203ENST00000409769 HNRNPMP52272 730 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLK1-203ENST00000409769 ERVK-21P61565 698 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 TAP1Q03518 808 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 FSTL1Q12841 308 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 PITRM1Q5JRX3 1037 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 OR14C36Q8NHC7 312 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 PROKR1Q8TCW9 393 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 GAB3Q8WWW8 586 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 AHCYL2Q96HN2 611 aaKnown RBP5.84□□□□□ -1.47
CLK1-203ENST00000409769 PAWRQ96IZ0 340 aaKnown RBP5.84□□□□□ -1.47
CLK1-203ENST00000409769 VTA1Q9NP79 307 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLK1-203ENST00000409769 CLCA2Q9UQC9 943 aa5.84□□□□□ -1.47
CLK1-203ENST00000409769 ZMYM4Q5VZL5 1548 aa5.84□□□□□ -1.48
CLK1-203ENST00000409769 ZNF518AQ6AHZ1 1483 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 RTEL1-TNFRSF6BF6WH68 1400 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 NAIPQ13075 1403 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 NCOA1Q15788 1441 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 ALG1L2C9J202 215 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 BMP5P22003 454 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 FBLP22087 321 aaKnown RBP5.83□□□□□ -1.48
CLK1-203ENST00000409769 MRPS9P82933 396 aaKnown RBP5.83□□□□□ -1.48
CLK1-203ENST00000409769 FAM83AQ86UY5 434 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 PGBD4Q96DM1 585 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 FAM193BQ96PV7 902 aaPredicted RBP5.83□□□□□ -1.48
CLK1-203ENST00000409769 ANO3Q9BYT9 981 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 SLC5A4Q9NY91 659 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 HECW2Q9P2P5 1572 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 ATP7AQ04656 1500 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 DENND4BO75064 1496 aaPredicted RBP5.83□□□□□ -1.48
CLK1-203ENST00000409769 MLH3Q9UHC1 1453 aa5.83□□□□□ -1.48
CLK1-203ENST00000409769 SETD5Q9C0A6 1442 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 KDM6BO15054 1643 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 A0A1W2PR48 441 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 HOXA3O43365 443 aaPredicted RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 B3GALT2O43825 422 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 LMNAP02545 664 aaKnown RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 GAAP10253 952 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 XPAP23025 273 aaPredicted RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 NRG3P56975 720 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 MEF2AQ02078 507 aaPredicted RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 TRIM25Q14258 630 aaKnown RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 PTPROQ16827 1216 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 UGT8Q16880 541 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.82□□□□□ -1.48
CLK1-203ENST00000409769 INAVAQ3KP66 663 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 MBNL2Q5VZF2 373 aaKnown RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 GLB1L2Q8IW92 636 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 FDXACB1Q9BRP7 624 aaPredicted RBP5.82□□□□□ -1.48
CLK1-203ENST00000409769 ENKD1Q9H0I2 346 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 KCTD10Q9H3F6 313 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 SORCS3Q9UPU3 1222 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 HS3ST4Q9Y661 456 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 CDY2AQ9Y6F7 541 aa5.82□□□□□ -1.48
CLK1-203ENST00000409769 ABCA6Q8N139 1617 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 ANKRD30AQ9BXX3 1397 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 RAB3GAP2Q9H2M9 1393 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 TRIM75PA6NK02 468 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 GOLGA8AA7E2F4 631 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 ALDH1A2O94788 518 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 CLEC2LP0C7M8 214 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 MTHFD2P13995 350 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 LAG3P18627 525 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 TGM1P22735 817 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 PROZP22891 400 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 GPR3P46089 330 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 CDKN1CP49918 316 aaPredicted RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 TIGD2Q4W5G0 525 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 CT83Q5H943 113 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 CCDC62Q6P9F0 684 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 DOK3Q7L591 496 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 KCNK18Q7Z418 384 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 AFAP1Q8N556 730 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 PRPF38AQ8NAV1 312 aaKnown RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 CPT1CQ8TCG5 803 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 EAF2Q96CJ1 260 aaPredicted RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 DCLRE1CQ96SD1 692 aaKnown RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 CPPED1Q9BRF8 314 aaPredicted RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 SLC46A2Q9BY10 475 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 EPC1Q9H2F5 836 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 TOR3AQ9H497 397 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 PRDM12Q9H4Q4 367 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 C14orf119Q9NWQ9 140 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 NOP58Q9Y2X3 529 aaKnown RBP5.81□□□□□ -1.48
CLK1-203ENST00000409769 BCORL1Q5H9F3 1711 aa5.81□□□□□ -1.48
CLK1-203ENST00000409769 DUOX2Q9NRD8 1548 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 LY86O95711 162 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 TSPY4P0CV99 314 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 TSPY10P0CW01 314 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 HK1P19367 917 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 KRT85P78386 507 aa5.8□□□□□ -1.48
CLK1-203ENST00000409769 PPARAQ07869 468 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms