RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 LRIG3Q6UXM1 1119 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 ARHGEF18Q6ZSZ5 1173 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 SLC35C1Q96A29 364 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 ZWILCHQ9H900 591 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 GINS2Q9Y248 185 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 MRPL11Q9Y3B7 192 aaKnown RBP14.09□□□□□ -0.15
NFKB1-202ENST00000394820 PJA2O43164 708 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 ATP2A2P16615 1042 aaKnown RBP14.09□□□□□ -0.15
NFKB1-202ENST00000394820 SREBF1P36956 1147 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 NPEPPSP55786 919 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 PPATQ06203 517 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 SEZ6Q53EL9 994 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 ARMC9Q7Z3E5 817 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 FRMD5Q7Z6J6 570 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 CCDC89Q8N998 374 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 EDEM3Q9BZQ6 932 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 KCTD10Q9H3F6 313 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 SLCO1B3Q9NPD5 702 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 UBN1Q9NPG3 1134 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 APEX2Q9UBZ4 518 aa14.09□□□□□ -0.15
NFKB1-202ENST00000394820 NFIBO00712 420 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CLGNO14967 610 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CBX6O95503 412 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 PSMD6Q15008 389 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 NBPF20Q3BBV1 942 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CEP55Q53EZ4 464 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CASC4Q6P4E1 433 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 SLC47A2Q86VL8 602 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 NIM1KQ8IY84 436 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 FLAD1Q8NFF5 587 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 LNX1Q8TBB1 728 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-202ENST00000394820 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 IDI2Q9BXS1 227 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.16
NFKB1-202ENST00000394820 YY1AP1Q9H869 796 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 E2F8A0AVK6 867 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 DRD4P21917 467 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 PSMC4P43686 418 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 VAMP7P51809 220 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 GPS1Q13098 491 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 IZUMO3Q5VZ72 239 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 PADI6Q6TGC4 694 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 TTLL6Q8N841 843 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 UNC45AQ9H3U1 944 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
NFKB1-202ENST00000394820 KIAA1551Q9HCM1 1747 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 OPHN1O60890 802 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 SLITRK3O94933 977 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 EYA4O95677 639 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 NQO1P15559 274 aaKnown RBP14.08□□□□□ -0.16
NFKB1-202ENST00000394820 AGBL2Q5U5Z8 902 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 SCYL2Q6P3W7 929 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 CCDC62Q6P9F0 684 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 MIEF2Q96C03 454 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 PPP1R16BQ96T49 567 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 PCDHB4Q9Y5E5 795 aa14.08□□□□□ -0.16
NFKB1-202ENST00000394820 NAV1Q8NEY1 1877 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 KLRG2A4D1S0 409 aaPredicted RBP14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PDXKO00764 312 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 CHRNA3P32297 505 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 DRP2Q13474 957 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 ZCWPW2Q504Y3 356 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 ACTRT1Q8TDG2 376 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 MKL1Q969V6 931 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 CCDC124Q96CT7 223 aaKnown RBP14.07□□□□□ -0.16
NFKB1-202ENST00000394820 FAM213AQ9BRX8 229 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 AIPL1Q9NZN9 384 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PCSK1NQ9UHG2 260 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 SPDYE2BA6NHP3 402 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PODXLO00592 558 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 SPDYE6P0CI01 402 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PRELPP51888 382 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 STK33Q9BYT3 514 aa14.07□□□□□ -0.16
NFKB1-202ENST00000394820 COL5A3P25940 1745 aaPredicted RBP14.07□□□□□ -0.16
NFKB1-202ENST00000394820 PHF2O75151 1096 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 KRT16P08779 473 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 C6orf163Q5TEZ5 329 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 TATDN1Q6P1N9 297 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 RHOT2Q8IXI1 618 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 ANKRD35Q8N283 1001 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 LENG9Q96B70 501 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 RBM15Q96T37 977 aaKnown RBP eCLIP14.06□□□□□ -0.16
NFKB1-202ENST00000394820 CALN1Q9BXU9 219 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 CHST7Q9NS84 486 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 C1orf112Q9NSG2 853 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 DLGAP2Q9P1A6 1054 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 MAD1L1Q9Y6D9 718 aa14.06□□□□□ -0.16
NFKB1-202ENST00000394820 LRRIQ4A6NIV6 560 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms