RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CLDN3O15551 220 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 KCNA3P22001 575 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 PTPN4P29074 926 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 CUL3Q13618 768 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 TMEM266Q2M3C6 531 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 KIAA0825Q8IV33 1275 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 CCDC105Q8IYK2 499 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 SPATA16Q9BXB7 569 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 PREBQ9HCU5 417 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 SLAIN2Q9P270 581 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.42
SMARCA1-201ENST00000371121 POTEJP0CG39 1038 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 RTP1P59025 263 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TMEM62Q0P6H9 643 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 FASTKD3Q14CZ7 662 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 PDK4Q16654 411 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 NBPF5PQ86XG9 351 aaPredicted RBP12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 ARHGEF19Q8IW93 802 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 KLHL23Q8NBE8 558 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 GLIS1Q8NBF1 620 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 LENG9Q96B70 501 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TRIM4Q9C037 500 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 ATRNL1Q5VV63 1379 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 A0A1W2PPM1 405 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TMEM110-MUSTN1A8MSY1 372 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 FTLP02792 175 aaPredicted RBP12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 LYNP07948 512 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 FMO5P49326 533 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 DLG4P78352 724 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 MUM1Q2TAK8 710 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 VSIG1Q86XK7 387 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 KAT5Q92993 513 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 GRAMD1AQ96CP6 724 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 RUNDC3BQ96NL0 473 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 ZWILCHQ9H900 591 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 KIAA1586Q9HCI6 787 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 PARP2Q9UGN5 583 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 PCDHB13Q9Y5F0 798 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 C2orf71A6NGG8 1288 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 CAPN9O14815 690 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 MARK3P27448 753 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TNNI2P48788 182 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 AP1B1Q10567 949 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 TCERG1LQ5VWI1 586 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 BICDL1Q6ZP65 573 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 CROCCP2Q86T23 111 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 MYH11P35749 1972 aa12.45□□□□□ -0.42
SMARCA1-201ENST00000371121 FAM47DPA6NHR8 397 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 FSCN2O14926 492 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 SLC16A3O15427 465 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 PRPF4O43172 522 aaKnown RBP eCLIP12.44□□□□□ -0.422e-6■□□□□ 10.2
SMARCA1-201ENST00000371121 MTA2O94776 668 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 PSMG1O95456 288 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 UBTFL6P0CB48 400 aaPredicted RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 SERPINB4P48594 390 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 TTLL12Q14166 644 aaPredicted RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 DPY19L2Q6NUT2 758 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ETNPPLQ8TBG4 499 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 DTX3LQ8TDB6 740 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 LRRC8CQ8TDW0 803 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 FAM118BQ9BPY3 351 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 JMJD4Q9H9V9 463 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ACTL7BQ9Y614 415 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 TOM1O60784 492 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ZCCHC18P0CG32 403 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ADCY7P51828 1080 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 MESDQ14696 234 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 PKN2Q16513 984 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ARHGEF18Q6ZSZ5 1173 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 TTC7BQ86TV6 843 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ZSWIM2Q8NEG5 633 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ZBTB39O15060 712 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 ATP5HO75947 161 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 SMARCA1P28370 1054 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 CDK8P49336 464 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 STRN3Q13033 797 aa12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 PABPC4Q13310 644 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMARCA1-201ENST00000371121 LSAMPQ13449 338 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms